Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.56■■□□□ 1.04
RAD9AQ99638 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.56■■□□□ 1.04
RAD9AQ99638 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.56■■□□□ 1.04
RAD9AQ99638 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RAD9AQ99638 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.56■■□□□ 1.04
RAD9AQ99638 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAD9AQ99638 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAD9AQ99638 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAD9AQ99638 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.56■■□□□ 1.04
RAD9AQ99638 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAD9AQ99638 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAD9AQ99638 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAD9AQ99638 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RAD9AQ99638 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.55■■□□□ 1.04
RAD9AQ99638 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.55■■□□□ 1.04
RAD9AQ99638 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.55■■□□□ 1.04
RAD9AQ99638 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RAD9AQ99638 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.55■■□□□ 1.04
RAD9AQ99638 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAD9AQ99638 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.55■■□□□ 1.04
RAD9AQ99638 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAD9AQ99638 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.55■■□□□ 1.04
RAD9AQ99638 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAD9AQ99638 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RAD9AQ99638 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAD9AQ99638 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAD9AQ99638 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAD9AQ99638 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.55■■□□□ 1.04
RAD9AQ99638 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAD9AQ99638 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAD9AQ99638 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAD9AQ99638 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.54■■□□□ 1.04
RAD9AQ99638 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.54■■□□□ 1.04
RAD9AQ99638 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.54■■□□□ 1.04
RAD9AQ99638 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAD9AQ99638 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.54■■□□□ 1.04
RAD9AQ99638 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAD9AQ99638 LIN28AP1-201ENST00000429574 405 ntBASIC21.54■■□□□ 1.04
RAD9AQ99638 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
RAD9AQ99638 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
RAD9AQ99638 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.54■■□□□ 1.04
RAD9AQ99638 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RAD9AQ99638 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.54■■□□□ 1.04
RAD9AQ99638 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.54■■□□□ 1.04
RAD9AQ99638 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.54■■□□□ 1.04
RAD9AQ99638 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAD9AQ99638 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAD9AQ99638 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAD9AQ99638 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.53■■□□□ 1.04
RAD9AQ99638 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAD9AQ99638 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAD9AQ99638 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.53■■□□□ 1.04
RAD9AQ99638 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAD9AQ99638 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAD9AQ99638 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAD9AQ99638 AC010203.1-204ENST00000548782 407 ntBASIC21.53■■□□□ 1.04
RAD9AQ99638 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.53■■□□□ 1.04
RAD9AQ99638 AL031985.4-201ENST00000642138 673 ntBASIC21.53■■□□□ 1.04
RAD9AQ99638 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAD9AQ99638 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.53■■□□□ 1.04
RAD9AQ99638 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAD9AQ99638 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.53■■□□□ 1.04
RAD9AQ99638 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAD9AQ99638 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.52■■□□□ 1.04
RAD9AQ99638 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RAD9AQ99638 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAD9AQ99638 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAD9AQ99638 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.52■■□□□ 1.04
RAD9AQ99638 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.52■■□□□ 1.04
RAD9AQ99638 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAD9AQ99638 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAD9AQ99638 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAD9AQ99638 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.52■■□□□ 1.04
RAD9AQ99638 WWOX-216ENST00000569818 525 ntBASIC21.52■■□□□ 1.04
RAD9AQ99638 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.52■■□□□ 1.04
RAD9AQ99638 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.52■■□□□ 1.04
RAD9AQ99638 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RAD9AQ99638 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.52■■□□□ 1.04
RAD9AQ99638 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAD9AQ99638 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAD9AQ99638 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RAD9AQ99638 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAD9AQ99638 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAD9AQ99638 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RAD9AQ99638 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAD9AQ99638 ATP5G1P1-201ENST00000448724 379 ntBASIC21.51■■□□□ 1.03
RAD9AQ99638 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.51■■□□□ 1.03
RAD9AQ99638 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAD9AQ99638 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAD9AQ99638 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAD9AQ99638 C2orf69P3-201ENST00000565542 1120 ntBASIC21.51■■□□□ 1.03
RAD9AQ99638 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.51■■□□□ 1.03
RAD9AQ99638 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RAD9AQ99638 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAD9AQ99638 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAD9AQ99638 FSCN1P1-201ENST00000568912 1481 ntBASIC21.51■■□□□ 1.03
RAD9AQ99638 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAD9AQ99638 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.5■■□□□ 1.03
RAD9AQ99638 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAD9AQ99638 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms