Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CDK5RAP2Q96SN8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.8■■□□□ 1.4
CDK5RAP2Q96SN8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.8■■□□□ 1.4
CDK5RAP2Q96SN8 AL353708.3-201ENST00000610272 989 ntBASIC23.8■■□□□ 1.4
CDK5RAP2Q96SN8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.8■■□□□ 1.4
CDK5RAP2Q96SN8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CDK5RAP2Q96SN8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CDK5RAP2Q96SN8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.8■■□□□ 1.4
CDK5RAP2Q96SN8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CDK5RAP2Q96SN8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDK5RAP2Q96SN8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDK5RAP2Q96SN8 NBPF21P-201ENST00000425093 1451 ntBASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 YBX1P10-201ENST00000444752 975 ntBASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CDK5RAP2Q96SN8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.78■■□□□ 1.4
CDK5RAP2Q96SN8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDK5RAP2Q96SN8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
CDK5RAP2Q96SN8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDK5RAP2Q96SN8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
CDK5RAP2Q96SN8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDK5RAP2Q96SN8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
CDK5RAP2Q96SN8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDK5RAP2Q96SN8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CDK5RAP2Q96SN8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CDK5RAP2Q96SN8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.77■■□□□ 1.4
CDK5RAP2Q96SN8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.77■■□□□ 1.4
CDK5RAP2Q96SN8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.77■■□□□ 1.4
CDK5RAP2Q96SN8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.77■■□□□ 1.4
CDK5RAP2Q96SN8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.77■■□□□ 1.4
CDK5RAP2Q96SN8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.77■■□□□ 1.4
CDK5RAP2Q96SN8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDK5RAP2Q96SN8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDK5RAP2Q96SN8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDK5RAP2Q96SN8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.77■■□□□ 1.4
CDK5RAP2Q96SN8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDK5RAP2Q96SN8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.77■■□□□ 1.4
CDK5RAP2Q96SN8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.77■■□□□ 1.4
CDK5RAP2Q96SN8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
CDK5RAP2Q96SN8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.76■■□□□ 1.39
CDK5RAP2Q96SN8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.76■■□□□ 1.39
CDK5RAP2Q96SN8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDK5RAP2Q96SN8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDK5RAP2Q96SN8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.76■■□□□ 1.39
CDK5RAP2Q96SN8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CDK5RAP2Q96SN8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDK5RAP2Q96SN8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 KRT8P17-201ENST00000453110 1448 ntBASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 PRKY-204ENST00000533551 1019 ntBASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CDK5RAP2Q96SN8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDK5RAP2Q96SN8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDK5RAP2Q96SN8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDK5RAP2Q96SN8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CDK5RAP2Q96SN8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CDK5RAP2Q96SN8 C1QL1P1-201ENST00000568105 661 ntBASIC23.74■■□□□ 1.39
CDK5RAP2Q96SN8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.74■■□□□ 1.39
CDK5RAP2Q96SN8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDK5RAP2Q96SN8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDK5RAP2Q96SN8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CDK5RAP2Q96SN8 AC007375.3-201ENST00000600936 2314 ntBASIC23.74■■□□□ 1.39
CDK5RAP2Q96SN8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDK5RAP2Q96SN8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDK5RAP2Q96SN8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDK5RAP2Q96SN8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDK5RAP2Q96SN8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.73■■□□□ 1.39
CDK5RAP2Q96SN8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDK5RAP2Q96SN8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms