Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SPG11Q96JI7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SPG11Q96JI7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.09■□□□□ 0.33
SPG11Q96JI7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
SPG11Q96JI7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.09■□□□□ 0.33
SPG11Q96JI7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPG11Q96JI7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPG11Q96JI7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPG11Q96JI7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SPG11Q96JI7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPG11Q96JI7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPG11Q96JI7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.08■□□□□ 0.33
SPG11Q96JI7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPG11Q96JI7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.08■□□□□ 0.33
SPG11Q96JI7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.08■□□□□ 0.33
SPG11Q96JI7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SPG11Q96JI7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SPG11Q96JI7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPG11Q96JI7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPG11Q96JI7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPG11Q96JI7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.08■□□□□ 0.32
SPG11Q96JI7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SPG11Q96JI7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPG11Q96JI7 AC026396.1-201ENST00000419388 421 ntBASIC17.08■□□□□ 0.32
SPG11Q96JI7 AC063952.2-201ENST00000498792 1227 ntBASIC17.08■□□□□ 0.32
SPG11Q96JI7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPG11Q96JI7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.08■□□□□ 0.32
SPG11Q96JI7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.08■□□□□ 0.32
SPG11Q96JI7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.08■□□□□ 0.32
SPG11Q96JI7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SPG11Q96JI7 AL121906.2-201ENST00000621597 723 ntBASIC17.08■□□□□ 0.32
SPG11Q96JI7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
SPG11Q96JI7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.08■□□□□ 0.32
SPG11Q96JI7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPG11Q96JI7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPG11Q96JI7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPG11Q96JI7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPG11Q96JI7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.07■□□□□ 0.32
SPG11Q96JI7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SPG11Q96JI7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPG11Q96JI7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPG11Q96JI7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SPG11Q96JI7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPG11Q96JI7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.07■□□□□ 0.32
SPG11Q96JI7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.07■□□□□ 0.32
SPG11Q96JI7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.07■□□□□ 0.32
SPG11Q96JI7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SPG11Q96JI7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.07■□□□□ 0.32
SPG11Q96JI7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPG11Q96JI7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPG11Q96JI7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SPG11Q96JI7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPG11Q96JI7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPG11Q96JI7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPG11Q96JI7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPG11Q96JI7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SPG11Q96JI7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.07■□□□□ 0.32
SPG11Q96JI7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPG11Q96JI7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPG11Q96JI7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.07■□□□□ 0.32
SPG11Q96JI7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SPG11Q96JI7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SPG11Q96JI7 AL445675.2-201ENST00000620291 557 ntBASIC17.07■□□□□ 0.32
SPG11Q96JI7 AC006011.2-201ENST00000621313 1158 ntBASIC17.07■□□□□ 0.32
SPG11Q96JI7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.07■□□□□ 0.32
SPG11Q96JI7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.07■□□□□ 0.32
SPG11Q96JI7 MYC-208ENST00000641036 567 ntBASIC17.07■□□□□ 0.32
SPG11Q96JI7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPG11Q96JI7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPG11Q96JI7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SPG11Q96JI7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPG11Q96JI7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
SPG11Q96JI7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPG11Q96JI7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPG11Q96JI7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPG11Q96JI7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.06■□□□□ 0.32
SPG11Q96JI7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.06■□□□□ 0.32
SPG11Q96JI7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SPG11Q96JI7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SPG11Q96JI7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SPG11Q96JI7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPG11Q96JI7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SPG11Q96JI7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
SPG11Q96JI7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPG11Q96JI7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPG11Q96JI7 AL031133.1-201ENST00000406807 723 ntBASIC17.06■□□□□ 0.32
SPG11Q96JI7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
SPG11Q96JI7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.06■□□□□ 0.32
SPG11Q96JI7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
SPG11Q96JI7 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.06■□□□□ 0.32
SPG11Q96JI7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.06■□□□□ 0.32
SPG11Q96JI7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPG11Q96JI7 AL031985.4-201ENST00000642138 673 ntBASIC17.06■□□□□ 0.32
SPG11Q96JI7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPG11Q96JI7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPG11Q96JI7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPG11Q96JI7 PTBP1P-201ENST00000554374 1601 ntBASIC17.05■□□□□ 0.32
SPG11Q96JI7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.05■□□□□ 0.32
SPG11Q96JI7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
SPG11Q96JI7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms