Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2E3Q969T4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.31■□□□□ 0.68
UBE2E3Q969T4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2E3Q969T4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2E3Q969T4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2E3Q969T4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.31■□□□□ 0.68
UBE2E3Q969T4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
UBE2E3Q969T4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.31■□□□□ 0.68
UBE2E3Q969T4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UBE2E3Q969T4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2E3Q969T4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.31■□□□□ 0.68
UBE2E3Q969T4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2E3Q969T4 KRT17P1-201ENST00000399211 1546 ntBASIC19.3■□□□□ 0.68
UBE2E3Q969T4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.3■□□□□ 0.68
UBE2E3Q969T4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2E3Q969T4 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.3■□□□□ 0.68
UBE2E3Q969T4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
UBE2E3Q969T4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
UBE2E3Q969T4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.3■□□□□ 0.68
UBE2E3Q969T4 HLA-G-202ENST00000376815 851 ntBASIC19.3■□□□□ 0.68
UBE2E3Q969T4 HLA-G-203ENST00000376818 1127 ntBASIC19.3■□□□□ 0.68
UBE2E3Q969T4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.3■□□□□ 0.68
UBE2E3Q969T4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.3■□□□□ 0.68
UBE2E3Q969T4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.3■□□□□ 0.68
UBE2E3Q969T4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.3■□□□□ 0.68
UBE2E3Q969T4 AC092666.2-201ENST00000613287 246 ntBASIC19.3■□□□□ 0.68
UBE2E3Q969T4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.3■□□□□ 0.68
UBE2E3Q969T4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2E3Q969T4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.3■□□□□ 0.68
UBE2E3Q969T4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.3■□□□□ 0.68
UBE2E3Q969T4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 KRT8P20-201ENST00000423953 1409 ntBASIC19.29■□□□□ 0.68
UBE2E3Q969T4 KRT8P17-201ENST00000453110 1448 ntBASIC19.29■□□□□ 0.68
UBE2E3Q969T4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 AL031963.3-201ENST00000606441 850 ntBASIC19.29■□□□□ 0.68
UBE2E3Q969T4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
UBE2E3Q969T4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 BX119927.1-201ENST00000636596 1552 ntBASIC19.28■□□□□ 0.68
UBE2E3Q969T4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 BX276092.2-201ENST00000417668 665 ntBASIC19.28■□□□□ 0.68
UBE2E3Q969T4 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.28■□□□□ 0.68
UBE2E3Q969T4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 AC083906.2-201ENST00000511578 360 ntBASIC19.28■□□□□ 0.68
UBE2E3Q969T4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
UBE2E3Q969T4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 PTBP1P-201ENST00000554374 1601 ntBASIC19.27■□□□□ 0.68
UBE2E3Q969T4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 SLC29A4P1-201ENST00000398760 971 ntBASIC19.27■□□□□ 0.68
UBE2E3Q969T4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.27■□□□□ 0.68
UBE2E3Q969T4 AC023632.3-201ENST00000521633 145 ntBASIC19.27■□□□□ 0.68
UBE2E3Q969T4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms