Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 AC008687.6-201ENST00000596318 630 ntBASIC19.95■□□□□ 0.78
SCAMP4Q969E2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 LINC01006-201ENST00000333319 2292 ntBASIC19.95■□□□□ 0.78
SCAMP4Q969E2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.95■□□□□ 0.78
SCAMP4Q969E2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 KRT18P29-201ENST00000397031 1267 ntBASIC19.94■□□□□ 0.78
SCAMP4Q969E2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 AL031963.3-201ENST00000606441 850 ntBASIC19.94■□□□□ 0.78
SCAMP4Q969E2 ITM2C-210ENST00000620962 501 ntBASIC19.94■□□□□ 0.78
SCAMP4Q969E2 TMEM191A-211ENST00000637163 1067 ntBASIC19.94■□□□□ 0.78
SCAMP4Q969E2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCAMP4Q969E2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 KRT8P17-201ENST00000453110 1448 ntBASIC19.93■□□□□ 0.78
SCAMP4Q969E2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 AL512408.1-201ENST00000569378 2000 ntBASIC19.93■□□□□ 0.78
SCAMP4Q969E2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 AC128676.1-201ENST00000454392 318 ntBASIC19.93■□□□□ 0.78
SCAMP4Q969E2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 AC120498.8-201ENST00000614275 531 ntBASIC19.93■□□□□ 0.78
SCAMP4Q969E2 AC073648.6-201ENST00000641589 218 ntBASIC19.93■□□□□ 0.78
SCAMP4Q969E2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 KRT8P20-201ENST00000423953 1409 ntBASIC19.93■□□□□ 0.78
SCAMP4Q969E2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCAMP4Q969E2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SCAMP4Q969E2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCAMP4Q969E2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.92■□□□□ 0.78
SCAMP4Q969E2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCAMP4Q969E2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCAMP4Q969E2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCAMP4Q969E2 HLA-G-202ENST00000376815 851 ntBASIC19.92■□□□□ 0.78
SCAMP4Q969E2 HLA-G-203ENST00000376818 1127 ntBASIC19.92■□□□□ 0.78
SCAMP4Q969E2 AC233263.1-201ENST00000578059 224 ntBASIC19.92■□□□□ 0.78
SCAMP4Q969E2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.92■□□□□ 0.78
SCAMP4Q969E2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCAMP4Q969E2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
SCAMP4Q969E2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCAMP4Q969E2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCAMP4Q969E2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCAMP4Q969E2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCAMP4Q969E2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SCAMP4Q969E2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms