Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPB3Q92617 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPB3Q92617 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPB3Q92617 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPB3Q92617 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPB3Q92617 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPB3Q92617 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.8■□□□□ 0.12
NPIPB3Q92617 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPB3Q92617 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPB3Q92617 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPB3Q92617 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPB3Q92617 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPB3Q92617 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.8■□□□□ 0.12
NPIPB3Q92617 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPB3Q92617 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NPIPB3Q92617 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.8■□□□□ 0.12
NPIPB3Q92617 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NPIPB3Q92617 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPB3Q92617 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPB3Q92617 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPB3Q92617 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPB3Q92617 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPB3Q92617 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.8■□□□□ 0.12
NPIPB3Q92617 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.8■□□□□ 0.12
NPIPB3Q92617 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NPIPB3Q92617 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.8■□□□□ 0.12
NPIPB3Q92617 AC116562.4-201ENST00000641316 2276 ntBASIC15.8■□□□□ 0.12
NPIPB3Q92617 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.8■□□□□ 0.12
NPIPB3Q92617 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPB3Q92617 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPB3Q92617 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
NPIPB3Q92617 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPB3Q92617 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPB3Q92617 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.8■□□□□ 0.12
NPIPB3Q92617 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPB3Q92617 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPB3Q92617 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPB3Q92617 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPB3Q92617 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
NPIPB3Q92617 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPB3Q92617 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPB3Q92617 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPB3Q92617 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPB3Q92617 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPB3Q92617 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPB3Q92617 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.79■□□□□ 0.12
NPIPB3Q92617 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
NPIPB3Q92617 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.79■□□□□ 0.12
NPIPB3Q92617 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.79■□□□□ 0.12
NPIPB3Q92617 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPB3Q92617 AC087289.5-201ENST00000586076 3175 ntBASIC15.79■□□□□ 0.12
NPIPB3Q92617 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.79■□□□□ 0.12
NPIPB3Q92617 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPB3Q92617 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPB3Q92617 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPB3Q92617 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPB3Q92617 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPB3Q92617 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.79■□□□□ 0.12
NPIPB3Q92617 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPB3Q92617 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
NPIPB3Q92617 BX119927.1-201ENST00000636596 1552 ntBASIC15.79■□□□□ 0.12
NPIPB3Q92617 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
NPIPB3Q92617 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.78■□□□□ 0.12
NPIPB3Q92617 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NPIPB3Q92617 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
NPIPB3Q92617 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPB3Q92617 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.78■□□□□ 0.12
NPIPB3Q92617 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.78■□□□□ 0.12
NPIPB3Q92617 AC097381.1-201ENST00000429019 1296 ntBASIC15.78■□□□□ 0.12
NPIPB3Q92617 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPB3Q92617 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.78■□□□□ 0.12
NPIPB3Q92617 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NPIPB3Q92617 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 TMEM179-206ENST00000616017 1645 ntBASIC15.78■□□□□ 0.12
NPIPB3Q92617 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPB3Q92617 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
NPIPB3Q92617 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPB3Q92617 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPB3Q92617 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NPIPB3Q92617 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms