Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATL1Q8WXF7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATL1Q8WXF7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATL1Q8WXF7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.58■□□□□ 0.73
ATL1Q8WXF7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
ATL1Q8WXF7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATL1Q8WXF7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.58■□□□□ 0.73
ATL1Q8WXF7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
ATL1Q8WXF7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATL1Q8WXF7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATL1Q8WXF7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
ATL1Q8WXF7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATL1Q8WXF7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATL1Q8WXF7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATL1Q8WXF7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATL1Q8WXF7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATL1Q8WXF7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATL1Q8WXF7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATL1Q8WXF7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATL1Q8WXF7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATL1Q8WXF7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATL1Q8WXF7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATL1Q8WXF7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.57■□□□□ 0.72
ATL1Q8WXF7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.57■□□□□ 0.72
ATL1Q8WXF7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.57■□□□□ 0.72
ATL1Q8WXF7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.57■□□□□ 0.72
ATL1Q8WXF7 C2orf69P4-201ENST00000565394 541 ntBASIC19.57■□□□□ 0.72
ATL1Q8WXF7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.57■□□□□ 0.72
ATL1Q8WXF7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATL1Q8WXF7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATL1Q8WXF7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.57■□□□□ 0.72
ATL1Q8WXF7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATL1Q8WXF7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATL1Q8WXF7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 KRT17P1-201ENST00000399211 1546 ntBASIC19.56■□□□□ 0.72
ATL1Q8WXF7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 AC099778.1-201ENST00000568593 1911 ntBASIC19.56■□□□□ 0.72
ATL1Q8WXF7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATL1Q8WXF7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATL1Q8WXF7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.55■□□□□ 0.72
ATL1Q8WXF7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATL1Q8WXF7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATL1Q8WXF7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATL1Q8WXF7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.55■□□□□ 0.72
ATL1Q8WXF7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ATL1Q8WXF7 BX276092.2-201ENST00000417668 665 ntBASIC19.55■□□□□ 0.72
ATL1Q8WXF7 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.55■□□□□ 0.72
ATL1Q8WXF7 AC083906.2-201ENST00000511578 360 ntBASIC19.55■□□□□ 0.72
ATL1Q8WXF7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.55■□□□□ 0.72
ATL1Q8WXF7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.55■□□□□ 0.72
ATL1Q8WXF7 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.55■□□□□ 0.72
ATL1Q8WXF7 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.55■□□□□ 0.72
ATL1Q8WXF7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ATL1Q8WXF7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATL1Q8WXF7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATL1Q8WXF7 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.55■□□□□ 0.72
ATL1Q8WXF7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATL1Q8WXF7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.54■□□□□ 0.72
ATL1Q8WXF7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATL1Q8WXF7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATL1Q8WXF7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATL1Q8WXF7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATL1Q8WXF7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATL1Q8WXF7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.54■□□□□ 0.72
ATL1Q8WXF7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.54■□□□□ 0.72
ATL1Q8WXF7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.54■□□□□ 0.72
ATL1Q8WXF7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
ATL1Q8WXF7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms