Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPS4Y2Q8TD47 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
RPS4Y2Q8TD47 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RPS4Y2Q8TD47 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.56■□□□□ 0.4
RPS4Y2Q8TD47 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.56■□□□□ 0.4
RPS4Y2Q8TD47 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.56■□□□□ 0.4
RPS4Y2Q8TD47 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPS4Y2Q8TD47 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPS4Y2Q8TD47 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPS4Y2Q8TD47 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPS4Y2Q8TD47 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 AC097381.1-201ENST00000429019 1296 ntBASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 AC087633.2-202ENST00000565166 1439 ntBASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS4Y2Q8TD47 PTBP1P-201ENST00000554374 1601 ntBASIC17.54■□□□□ 0.4
RPS4Y2Q8TD47 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RPS4Y2Q8TD47 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPS4Y2Q8TD47 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RPS4Y2Q8TD47 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPS4Y2Q8TD47 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RPS4Y2Q8TD47 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPS4Y2Q8TD47 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.54■□□□□ 0.4
RPS4Y2Q8TD47 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.54■□□□□ 0.4
RPS4Y2Q8TD47 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPS4Y2Q8TD47 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPS4Y2Q8TD47 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RPS4Y2Q8TD47 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPS4Y2Q8TD47 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.54■□□□□ 0.4
RPS4Y2Q8TD47 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 TERF1P2-201ENST00000583350 1212 ntBASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 AL356652.1-201ENST00000615962 565 ntBASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4Y2Q8TD47 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4Y2Q8TD47 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.52■□□□□ 0.4
RPS4Y2Q8TD47 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RPS4Y2Q8TD47 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4Y2Q8TD47 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4Y2Q8TD47 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.52■□□□□ 0.4
RPS4Y2Q8TD47 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4Y2Q8TD47 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RPS4Y2Q8TD47 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4Y2Q8TD47 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4Y2Q8TD47 PGM5P4-201ENST00000421970 445 ntBASIC17.52■□□□□ 0.4
RPS4Y2Q8TD47 CDV3P1-201ENST00000471403 739 ntBASIC17.52■□□□□ 0.4
RPS4Y2Q8TD47 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
RPS4Y2Q8TD47 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4Y2Q8TD47 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4Y2Q8TD47 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms