Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD6Q8TD26 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD6Q8TD26 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.3■□□□□ 0.52
CHD6Q8TD26 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.3■□□□□ 0.52
CHD6Q8TD26 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD6Q8TD26 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.3■□□□□ 0.52
CHD6Q8TD26 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CHD6Q8TD26 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD6Q8TD26 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.3■□□□□ 0.52
CHD6Q8TD26 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD6Q8TD26 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD6Q8TD26 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD6Q8TD26 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD6Q8TD26 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.29■□□□□ 0.52
CHD6Q8TD26 AC092329.2-201ENST00000598402 547 ntBASIC18.29■□□□□ 0.52
CHD6Q8TD26 AC116562.4-202ENST00000641738 218 ntBASIC18.29■□□□□ 0.52
CHD6Q8TD26 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD6Q8TD26 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD6Q8TD26 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD6Q8TD26 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD6Q8TD26 AC239800.4-201ENST00000603712 296 ntBASIC18.29■□□□□ 0.52
CHD6Q8TD26 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD6Q8TD26 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD6Q8TD26 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD6Q8TD26 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD6Q8TD26 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.29■□□□□ 0.52
CHD6Q8TD26 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHD6Q8TD26 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD6Q8TD26 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.29■□□□□ 0.52
CHD6Q8TD26 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CHD6Q8TD26 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD6Q8TD26 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CHD6Q8TD26 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.28■□□□□ 0.52
CHD6Q8TD26 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD6Q8TD26 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD6Q8TD26 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.28■□□□□ 0.52
CHD6Q8TD26 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.28■□□□□ 0.52
CHD6Q8TD26 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHD6Q8TD26 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.28■□□□□ 0.52
CHD6Q8TD26 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.28■□□□□ 0.52
CHD6Q8TD26 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.28■□□□□ 0.52
CHD6Q8TD26 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.28■□□□□ 0.52
CHD6Q8TD26 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CHD6Q8TD26 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.28■□□□□ 0.52
CHD6Q8TD26 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD6Q8TD26 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.28■□□□□ 0.52
CHD6Q8TD26 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.28■□□□□ 0.52
CHD6Q8TD26 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD6Q8TD26 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD6Q8TD26 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CHD6Q8TD26 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD6Q8TD26 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHD6Q8TD26 AL390719.2-201ENST00000606993 987 ntBASIC18.28■□□□□ 0.52
CHD6Q8TD26 AC087742.1-201ENST00000575880 1738 ntBASIC18.27■□□□□ 0.52
CHD6Q8TD26 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHD6Q8TD26 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHD6Q8TD26 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.27■□□□□ 0.52
CHD6Q8TD26 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.27■□□□□ 0.52
CHD6Q8TD26 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHD6Q8TD26 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHD6Q8TD26 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHD6Q8TD26 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHD6Q8TD26 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHD6Q8TD26 HLA-G-203ENST00000376818 1127 ntBASIC18.27■□□□□ 0.51
CHD6Q8TD26 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.27■□□□□ 0.51
CHD6Q8TD26 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.27■□□□□ 0.51
CHD6Q8TD26 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
CHD6Q8TD26 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.27■□□□□ 0.51
CHD6Q8TD26 AC010653.2-201ENST00000623505 997 ntBASIC18.27■□□□□ 0.51
CHD6Q8TD26 AL023973.1-201ENST00000624619 620 ntBASIC18.27■□□□□ 0.51
CHD6Q8TD26 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CHD6Q8TD26 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHD6Q8TD26 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.26■□□□□ 0.51
CHD6Q8TD26 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHD6Q8TD26 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHD6Q8TD26 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHD6Q8TD26 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.26■□□□□ 0.51
CHD6Q8TD26 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.26■□□□□ 0.51
CHD6Q8TD26 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.26■□□□□ 0.51
CHD6Q8TD26 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.26■□□□□ 0.51
CHD6Q8TD26 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CHD6Q8TD26 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHD6Q8TD26 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CHD6Q8TD26 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.26■□□□□ 0.51
CHD6Q8TD26 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CHD6Q8TD26 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CHD6Q8TD26 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHD6Q8TD26 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHD6Q8TD26 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHD6Q8TD26 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.26■□□□□ 0.51
CHD6Q8TD26 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHD6Q8TD26 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHD6Q8TD26 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CHD6Q8TD26 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CHD6Q8TD26 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CHD6Q8TD26 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHD6Q8TD26 TSPY19P-201ENST00000418461 509 ntBASIC18.25■□□□□ 0.51
CHD6Q8TD26 TSPY18P-201ENST00000441642 509 ntBASIC18.25■□□□□ 0.51
CHD6Q8TD26 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CHD6Q8TD26 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms