Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01560Q8TB33 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01560Q8TB33 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01560Q8TB33 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
LINC01560Q8TB33 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.43■□□□□ 0.38
LINC01560Q8TB33 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01560Q8TB33 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01560Q8TB33 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LINC01560Q8TB33 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC01560Q8TB33 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC01560Q8TB33 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.43■□□□□ 0.38
LINC01560Q8TB33 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.43■□□□□ 0.38
LINC01560Q8TB33 AL121906.2-201ENST00000621597 723 ntBASIC17.43■□□□□ 0.38
LINC01560Q8TB33 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01560Q8TB33 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01560Q8TB33 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
LINC01560Q8TB33 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 AC133561.1-201ENST00000568600 2415 ntBASIC17.41■□□□□ 0.38
LINC01560Q8TB33 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 HLA-G-202ENST00000376815 851 ntBASIC17.41■□□□□ 0.38
LINC01560Q8TB33 HLA-G-203ENST00000376818 1127 ntBASIC17.41■□□□□ 0.38
LINC01560Q8TB33 AL353807.1-201ENST00000427475 662 ntBASIC17.41■□□□□ 0.38
LINC01560Q8TB33 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 AC004264.1-201ENST00000608354 794 ntBASIC17.41■□□□□ 0.38
LINC01560Q8TB33 AL353708.3-201ENST00000610272 989 ntBASIC17.41■□□□□ 0.38
LINC01560Q8TB33 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01560Q8TB33 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.4■□□□□ 0.38
LINC01560Q8TB33 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LINC01560Q8TB33 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01560Q8TB33 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01560Q8TB33 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.4■□□□□ 0.38
LINC01560Q8TB33 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC01560Q8TB33 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.4■□□□□ 0.38
LINC01560Q8TB33 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC01560Q8TB33 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.4■□□□□ 0.38
LINC01560Q8TB33 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.4■□□□□ 0.38
LINC01560Q8TB33 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01560Q8TB33 AC097493.4-201ENST00000641197 219 ntBASIC17.4■□□□□ 0.38
LINC01560Q8TB33 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01560Q8TB33 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
LINC01560Q8TB33 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01560Q8TB33 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01560Q8TB33 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01560Q8TB33 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LINC01560Q8TB33 MMP23A-201ENST00000234610 1017 ntBASIC17.39■□□□□ 0.37
LINC01560Q8TB33 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01560Q8TB33 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01560Q8TB33 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
LINC01560Q8TB33 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01560Q8TB33 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms