Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 FEM1AP1-201ENST00000431297 1995 ntBASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 PGM5P4-201ENST00000421970 445 ntBASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 C2orf69P4-201ENST00000565394 541 ntBASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 SOX15-203ENST00000570788 1093 ntBASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 AP006294.2-201ENST00000641667 209 ntBASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDND2Q8NHS1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDND2Q8NHS1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
CLDND2Q8NHS1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDND2Q8NHS1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDND2Q8NHS1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDND2Q8NHS1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDND2Q8NHS1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDND2Q8NHS1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDND2Q8NHS1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDND2Q8NHS1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.02■□□□□ 0.32
CLDND2Q8NHS1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDND2Q8NHS1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDND2Q8NHS1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDND2Q8NHS1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDND2Q8NHS1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.02■□□□□ 0.31
CLDND2Q8NHS1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLDND2Q8NHS1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 KRT17P3-201ENST00000420566 1262 ntBASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDND2Q8NHS1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLDND2Q8NHS1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDND2Q8NHS1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17■□□□□ 0.31
CLDND2Q8NHS1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17■□□□□ 0.31
CLDND2Q8NHS1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLDND2Q8NHS1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDND2Q8NHS1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLDND2Q8NHS1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17■□□□□ 0.31
CLDND2Q8NHS1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDND2Q8NHS1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms