Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 TSPY13P-201ENST00000338964 914 ntBASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC197Q8NCU1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 AC090340.1-201ENST00000620778 4980 ntBASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
CCDC197Q8NCU1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC197Q8NCU1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC197Q8NCU1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC197Q8NCU1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC197Q8NCU1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC197Q8NCU1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC197Q8NCU1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC197Q8NCU1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC197Q8NCU1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC197Q8NCU1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC197Q8NCU1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC197Q8NCU1 AP005435.1-201ENST00000529293 1178 ntBASIC19.89■□□□□ 0.77
CCDC197Q8NCU1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
CCDC197Q8NCU1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC197Q8NCU1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC197Q8NCU1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 AL032819.2-201ENST00000624543 2162 ntBASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 BX119927.1-201ENST00000636596 1552 ntBASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 MIR2861-201ENST00000636310 90 ntBASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC197Q8NCU1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms