Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRPF38AQ8NAV1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PRPF38AQ8NAV1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
PRPF38AQ8NAV1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRPF38AQ8NAV1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.21■■□□□ 1.31
PRPF38AQ8NAV1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.21■■□□□ 1.31
PRPF38AQ8NAV1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRPF38AQ8NAV1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PRPF38AQ8NAV1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRPF38AQ8NAV1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRPF38AQ8NAV1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRPF38AQ8NAV1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRPF38AQ8NAV1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRPF38AQ8NAV1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.2■■□□□ 1.31
PRPF38AQ8NAV1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRPF38AQ8NAV1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRPF38AQ8NAV1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRPF38AQ8NAV1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.2■■□□□ 1.3
PRPF38AQ8NAV1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRPF38AQ8NAV1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.2■■□□□ 1.3
PRPF38AQ8NAV1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.2■■□□□ 1.3
PRPF38AQ8NAV1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PRPF38AQ8NAV1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.2■■□□□ 1.3
PRPF38AQ8NAV1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PRPF38AQ8NAV1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PRPF38AQ8NAV1 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.2■■□□□ 1.3
PRPF38AQ8NAV1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRPF38AQ8NAV1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.2■■□□□ 1.3
PRPF38AQ8NAV1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.2■■□□□ 1.3
PRPF38AQ8NAV1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PRPF38AQ8NAV1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.19■■□□□ 1.3
PRPF38AQ8NAV1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRPF38AQ8NAV1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.19■■□□□ 1.3
PRPF38AQ8NAV1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRPF38AQ8NAV1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRPF38AQ8NAV1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.19■■□□□ 1.3
PRPF38AQ8NAV1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.19■■□□□ 1.3
PRPF38AQ8NAV1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRPF38AQ8NAV1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.19■■□□□ 1.3
PRPF38AQ8NAV1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.19■■□□□ 1.3
PRPF38AQ8NAV1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.19■■□□□ 1.3
PRPF38AQ8NAV1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRPF38AQ8NAV1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.19■■□□□ 1.3
PRPF38AQ8NAV1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.19■■□□□ 1.3
PRPF38AQ8NAV1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
PRPF38AQ8NAV1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 AL121906.2-201ENST00000621597 723 ntBASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 AC026310.3-201ENST00000625186 2373 ntBASIC23.18■■□□□ 1.3
PRPF38AQ8NAV1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 KRT8P20-201ENST00000423953 1409 ntBASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 KRT17P2-201ENST00000300992 1314 ntBASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 AL031963.3-201ENST00000606441 850 ntBASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.17■■□□□ 1.3
PRPF38AQ8NAV1 AC006128.1-201ENST00000624704 1661 ntBASIC23.16■■□□□ 1.3
PRPF38AQ8NAV1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.16■■□□□ 1.3
PRPF38AQ8NAV1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPF38AQ8NAV1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.16■■□□□ 1.3
PRPF38AQ8NAV1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PRPF38AQ8NAV1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPF38AQ8NAV1 FP700111.2-201ENST00000619190 1892 ntBASIC23.16■■□□□ 1.3
PRPF38AQ8NAV1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.16■■□□□ 1.3
PRPF38AQ8NAV1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PRPF38AQ8NAV1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PRPF38AQ8NAV1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PRPF38AQ8NAV1 TSPY7P-201ENST00000431358 1114 ntBASIC23.16■■□□□ 1.3
PRPF38AQ8NAV1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PRPF38AQ8NAV1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPF38AQ8NAV1 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms