Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC33Q8N5R6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC33Q8N5R6 AC112907.3-201ENST00000577781 2400 ntBASIC21.03■□□□□ 0.96
CCDC33Q8N5R6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC33Q8N5R6 AL596275.1-201ENST00000423464 877 ntBASIC21.03■□□□□ 0.96
CCDC33Q8N5R6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC33Q8N5R6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC33Q8N5R6 AC060766.5-201ENST00000590539 871 ntBASIC21.03■□□□□ 0.96
CCDC33Q8N5R6 AC008403.3-201ENST00000598924 454 ntBASIC21.03■□□□□ 0.96
CCDC33Q8N5R6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC33Q8N5R6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC33Q8N5R6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC33Q8N5R6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
CCDC33Q8N5R6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 LINC01521-201ENST00000504184 1943 ntBASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 KRT18P68-201ENST00000392293 1000 ntBASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC33Q8N5R6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC33Q8N5R6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.02■□□□□ 0.95
CCDC33Q8N5R6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC33Q8N5R6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 HLA-B-256ENST00000639848 1089 ntBASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 AC020907.5-201ENST00000624372 1936 ntBASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC33Q8N5R6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC33Q8N5R6 AL512408.1-201ENST00000569378 2000 ntBASIC21■□□□□ 0.95
CCDC33Q8N5R6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC33Q8N5R6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC33Q8N5R6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21■□□□□ 0.95
CCDC33Q8N5R6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC33Q8N5R6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC33Q8N5R6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC33Q8N5R6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC33Q8N5R6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21■□□□□ 0.95
CCDC33Q8N5R6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21■□□□□ 0.95
CCDC33Q8N5R6 MIR2861-201ENST00000636310 90 ntBASIC21■□□□□ 0.95
CCDC33Q8N5R6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21■□□□□ 0.95
CCDC33Q8N5R6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC33Q8N5R6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC33Q8N5R6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CCDC33Q8N5R6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
CCDC33Q8N5R6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC33Q8N5R6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21■□□□□ 0.95
CCDC33Q8N5R6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21■□□□□ 0.95
CCDC33Q8N5R6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms