Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 AC110285.6-201ENST00000617652 491 ntBASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 AC116562.4-201ENST00000641316 2276 ntBASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 AC123595.1-201ENST00000440769 1046 ntBASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LINC01561Q8N1V8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01561Q8N1V8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01561Q8N1V8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
LINC01561Q8N1V8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01561Q8N1V8 AL691432.2-201ENST00000607222 2038 ntBASIC13.46□□□□□ -0.26
LINC01561Q8N1V8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 TREX1-205ENST00000625293 1783 ntBASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 TESC-206ENST00000541210 936 ntTSL 3 BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 AL356652.1-201ENST00000615962 565 ntBASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 MIR6084-201ENST00000622012 110 ntBASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 AC087633.2-202ENST00000565166 1439 ntBASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LINC01561Q8N1V8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 AC005332.7-201ENST00000614046 2005 ntBASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms