Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 DPP3P2-201ENST00000416030 1696 ntBASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM42Q8IWZ5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
TRIM42Q8IWZ5 BX119927.1-201ENST00000636596 1552 ntBASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 MIR572-201ENST00000384983 95 ntBASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 AL691432.2-201ENST00000607222 2038 ntBASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM42Q8IWZ5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM42Q8IWZ5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 KRT8P36-201ENST00000489121 1440 ntBASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM42Q8IWZ5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms