Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF135Q8IUD6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.3■■□□□ 1
RNF135Q8IUD6 AC244015.2-201ENST00000616358 1861 ntBASIC21.3■■□□□ 1
RNF135Q8IUD6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF135Q8IUD6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF135Q8IUD6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF135Q8IUD6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.29■■□□□ 1
RNF135Q8IUD6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.29■■□□□ 1
RNF135Q8IUD6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF135Q8IUD6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.29■■□□□ 1
RNF135Q8IUD6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF135Q8IUD6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF135Q8IUD6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.29■■□□□ 1
RNF135Q8IUD6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF135Q8IUD6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RNF135Q8IUD6 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.29■■□□□ 1
RNF135Q8IUD6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RNF135Q8IUD6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.29■■□□□ 1
RNF135Q8IUD6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF135Q8IUD6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF135Q8IUD6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF135Q8IUD6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.29■■□□□ 1
RNF135Q8IUD6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF135Q8IUD6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF135Q8IUD6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF135Q8IUD6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF135Q8IUD6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RNF135Q8IUD6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF135Q8IUD6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RNF135Q8IUD6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RNF135Q8IUD6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RNF135Q8IUD6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RNF135Q8IUD6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF135Q8IUD6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.28■■□□□ 1
RNF135Q8IUD6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF135Q8IUD6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.28■■□□□ 1
RNF135Q8IUD6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.28■■□□□ 1
RNF135Q8IUD6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.28■■□□□ 1
RNF135Q8IUD6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.28■■□□□ 1
RNF135Q8IUD6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RNF135Q8IUD6 AC006557.6-201ENST00000623071 864 ntBASIC21.28■■□□□ 1
RNF135Q8IUD6 Z98882.1-201ENST00000622160 2253 ntBASIC21.28■■□□□ 1
RNF135Q8IUD6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.28■■□□□ 1
RNF135Q8IUD6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.28■■□□□ 1
RNF135Q8IUD6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RNF135Q8IUD6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF135Q8IUD6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF135Q8IUD6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.27■■□□□ 1
RNF135Q8IUD6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF135Q8IUD6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF135Q8IUD6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF135Q8IUD6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.27■■□□□ 1
RNF135Q8IUD6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF135Q8IUD6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF135Q8IUD6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.27■■□□□ 1
RNF135Q8IUD6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.27■■□□□ 1
RNF135Q8IUD6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.27■■□□□ 1
RNF135Q8IUD6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.27■■□□□ 1
RNF135Q8IUD6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.27■■□□□ 1
RNF135Q8IUD6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.27■■□□□ 1
RNF135Q8IUD6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.27■■□□□ 1
RNF135Q8IUD6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.27■■□□□ 1
RNF135Q8IUD6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.27■■□□□ 1
RNF135Q8IUD6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.27■■□□□ 1
RNF135Q8IUD6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.27■■□□□ 1
RNF135Q8IUD6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF135Q8IUD6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RNF135Q8IUD6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RNF135Q8IUD6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
RNF135Q8IUD6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
RNF135Q8IUD6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RNF135Q8IUD6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF135Q8IUD6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.26■□□□□ 0.99
RNF135Q8IUD6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF135Q8IUD6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF135Q8IUD6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF135Q8IUD6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
RNF135Q8IUD6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.26■□□□□ 0.99
RNF135Q8IUD6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF135Q8IUD6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RNF135Q8IUD6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.26■□□□□ 0.99
RNF135Q8IUD6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RNF135Q8IUD6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.26■□□□□ 0.99
RNF135Q8IUD6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF135Q8IUD6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.26■□□□□ 0.99
RNF135Q8IUD6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF135Q8IUD6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF135Q8IUD6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF135Q8IUD6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF135Q8IUD6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RNF135Q8IUD6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF135Q8IUD6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF135Q8IUD6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF135Q8IUD6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF135Q8IUD6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF135Q8IUD6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF135Q8IUD6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF135Q8IUD6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF135Q8IUD6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF135Q8IUD6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms