Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 SLC7A5P2-201ENST00000553010 536 ntBASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 AC123595.1-201ENST00000440769 1046 ntBASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 TERF1P2-201ENST00000583350 1212 ntBASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 AC120498.9-201ENST00000339021 3867 ntBASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PTCHD4Q6ZW05 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
PTCHD4Q6ZW05 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTCHD4Q6ZW05 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PTCHD4Q6ZW05 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTCHD4Q6ZW05 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
PTCHD4Q6ZW05 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 AC245052.3-201ENST00000450182 901 ntBASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 DUX4L2-201ENST00000561772 1275 ntBASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 AP001160.3-201ENST00000601484 763 ntBASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 DUX4L6-201ENST00000626483 1275 ntBASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 DUX4L1-201ENST00000627662 1275 ntBASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 DUX4L8-201ENST00000629013 1275 ntBASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 DUX4L3-201ENST00000630187 1275 ntBASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 DUX4L7-201ENST00000630678 1275 ntBASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 DUX4L5-201ENST00000630834 1275 ntBASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PTCHD4Q6ZW05 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 YBX1P1-201ENST00000445822 960 ntBASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 CCDC92B-201ENST00000575506 885 ntBASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 AC120498.10-201ENST00000621827 505 ntBASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms