Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00173Q6ZV60 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00173Q6ZV60 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 TMEM179-206ENST00000616017 1645 ntBASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 AC241377.3-202ENST00000626088 1088 ntBASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 AC241585.3-202ENST00000628937 1088 ntBASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 AC245100.8-202ENST00000629247 1058 ntBASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00173Q6ZV60 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.52□□□□□ -0.08
LINC00173Q6ZV60 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00173Q6ZV60 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LINC00173Q6ZV60 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00173Q6ZV60 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
LINC00173Q6ZV60 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00173Q6ZV60 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00173Q6ZV60 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00173Q6ZV60 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC00173Q6ZV60 AC006455.2-201ENST00000429931 906 ntBASIC14.52□□□□□ -0.09
LINC00173Q6ZV60 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC00173Q6ZV60 EXOG-217ENST00000630638 197 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC00173Q6ZV60 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00173Q6ZV60 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00173Q6ZV60 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC00173Q6ZV60 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
LINC00173Q6ZV60 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LINC00173Q6ZV60 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC00173Q6ZV60 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
LINC00173Q6ZV60 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00173Q6ZV60 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC00173Q6ZV60 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 AL691432.2-201ENST00000607222 2038 ntBASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 AC010141.3-201ENST00000456659 717 ntBASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 pRNA.6-201ENST00000610482 90 ntBASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 pRNA.5-201ENST00000612139 90 ntBASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 pRNA.11-201ENST00000618423 90 ntBASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 pRNA.13-201ENST00000619112 90 ntBASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 AC087239.1-201ENST00000622671 572 ntBASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00173Q6ZV60 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 LINC01465-201ENST00000408887 1940 ntBASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms