Protein–RNA interactions for Protein: Q6Q5P6

TY4A-H, Transposon Ty4-H Gag polyprotein, yeastyeast

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-HQ6Q5P6 tW(CCA)MtW(CCA)M 72 nt2.58□□□□□ -2
TY4A-HQ6Q5P6 tW(CCA)PtW(CCA)P 72 nt2.58□□□□□ -2
TY4A-HQ6Q5P6 HSH155YMR288W 2916 nt2.58□□□□□ -2
TY4A-HQ6Q5P6 YNL144CYNL144C 2223 nt2.57□□□□□ -2
TY4A-HQ6Q5P6 YDR354C-AYDR354C-A 144 nt2.57□□□□□ -2
TY4A-HQ6Q5P6 YHR180W-AYHR180W-A 183 nt2.57□□□□□ -2
TY4A-HQ6Q5P6 COX12YLR038C 252 nt2.57□□□□□ -2
TY4A-HQ6Q5P6 snR45snR45 172 nt2.57□□□□□ -2
TY4A-HQ6Q5P6 DCP2YNL118C 2913 nt2.57□□□□□ -2
TY4A-HQ6Q5P6 YBL005W-BYBL005W-B 5268 nt2.56□□□□□ -2
TY4A-HQ6Q5P6 YPL216WYPL216W 3309 nt2.56□□□□□ -2
TY4A-HQ6Q5P6 CSF1YLR087C 8877 nt2.56□□□□□ -2
TY4A-HQ6Q5P6 STF2YGR008C 255 nt2.56□□□□□ -2
TY4A-HQ6Q5P6 ENV11YGR071C 2583 nt2.55□□□□□ -2
TY4A-HQ6Q5P6 TUS1YLR425W 3924 nt2.55□□□□□ -2
TY4A-HQ6Q5P6 NEW1YPL226W 3591 nt2.55□□□□□ -2
TY4A-HQ6Q5P6 RGA1YOR127W 3024 nt2.55□□□□□ -2
TY4A-HQ6Q5P6 VPS13YLL040C 9435 nt2.54□□□□□ -2
TY4A-HQ6Q5P6 TOF1YNL273W 3717 nt2.54□□□□□ -2
TY4A-HQ6Q5P6 YPL150WYPL150W 2706 nt2.54□□□□□ -2
TY4A-HQ6Q5P6 SCP160YJL080C 3669 nt2.53□□□□□ -2
TY4A-HQ6Q5P6 APL2YKL135C 2181 nt2.53□□□□□ -2
TY4A-HQ6Q5P6 PHO91YNR013C 2685 nt2.53□□□□□ -2
TY4A-HQ6Q5P6 IFH1YLR223C 3258 nt2.53□□□□□ -2
TY4A-HQ6Q5P6 IST2YBR086C 2841 nt2.52□□□□□ -2.01
TY4A-HQ6Q5P6 DBP10YDL031W 2988 nt2.52□□□□□ -2.01
TY4A-HQ6Q5P6 YIL002W-AYIL002W-A 210 nt2.52□□□□□ -2.01
TY4A-HQ6Q5P6 YJL026C-AYJL026C-A 222 nt2.52□□□□□ -2.01
TY4A-HQ6Q5P6 YOR055WYOR055W 435 nt2.52□□□□□ -2.01
TY4A-HQ6Q5P6 IRA2YOL081W 9240 nt2.52□□□□□ -2.01
TY4A-HQ6Q5P6 RAV1YJR033C 4074 nt2.52□□□□□ -2.01
TY4A-HQ6Q5P6 YLL054CYLL054C 2532 nt2.51□□□□□ -2.01
TY4A-HQ6Q5P6 YCR087C-AYCR087C-A 462 nt2.51□□□□□ -2.01
TY4A-HQ6Q5P6 YOL098CYOL098C 3114 nt2.51□□□□□ -2.01
TY4A-HQ6Q5P6 ATG11YPR049C 3537 nt2.51□□□□□ -2.01
TY4A-HQ6Q5P6 UBR1YGR184C 5853 nt2.5□□□□□ -2.01
TY4A-HQ6Q5P6 SAP190YKR028W 3102 nt2.5□□□□□ -2.01
TY4A-HQ6Q5P6 SMC6YLR383W 3345 nt2.5□□□□□ -2.01
TY4A-HQ6Q5P6 YDR521WYDR521W 336 nt2.5□□□□□ -2.01
TY4A-HQ6Q5P6 ALK1YGL021W 2283 nt2.49□□□□□ -2.01
TY4A-HQ6Q5P6 snR70snR70 164 nt2.49□□□□□ -2.01
TY4A-HQ6Q5P6 TTI1YKL033W 3117 nt2.48□□□□□ -2.01
TY4A-HQ6Q5P6 STE11YLR362W 2154 nt2.47□□□□□ -2.01
TY4A-HQ6Q5P6 YGL182CYGL182C 324 nt2.47□□□□□ -2.01
TY4A-HQ6Q5P6 BUB1YGR188C 3066 nt2.47□□□□□ -2.01
TY4A-HQ6Q5P6 PDR1YGL013C 3207 nt2.47□□□□□ -2.01
TY4A-HQ6Q5P6 SAP185YJL098W 3177 nt2.47□□□□□ -2.01
TY4A-HQ6Q5P6 MMS22YLR320W 4365 nt2.47□□□□□ -2.01
TY4A-HQ6Q5P6 RSE1YML049C 4086 nt2.46□□□□□ -2.02
TY4A-HQ6Q5P6 MAK10YEL053C 2202 nt2.46□□□□□ -2.02
TY4A-HQ6Q5P6 YLR035C-AYLR035C-A 3468 nt2.46□□□□□ -2.02
TY4A-HQ6Q5P6 IRC8YJL051W 2469 nt2.45□□□□□ -2.02
TY4A-HQ6Q5P6 YAL067W-AYAL067W-A 228 nt2.45□□□□□ -2.02
TY4A-HQ6Q5P6 RCO1YMR075W 2055 nt2.44□□□□□ -2.02
TY4A-HQ6Q5P6 FKS3YMR306W 5358 nt2.44□□□□□ -2.02
TY4A-HQ6Q5P6 MLH3YPL164C 2148 nt2.44□□□□□ -2.02
TY4A-HQ6Q5P6 YPP1YGR198W 2454 nt2.43□□□□□ -2.02
TY4A-HQ6Q5P6 QCR9YGR183C 201 nt2.43□□□□□ -2.02
TY4A-HQ6Q5P6 DNF1YER166W 4716 nt2.43□□□□□ -2.02
TY4A-HQ6Q5P6 MET18YIL128W 3099 nt2.43□□□□□ -2.02
TY4A-HQ6Q5P6 BNI1YNL271C 5862 nt2.42□□□□□ -2.02
TY4A-HQ6Q5P6 LHS1YKL073W 2646 nt2.42□□□□□ -2.02
TY4A-HQ6Q5P6 RTT107YHR154W 3213 nt2.42□□□□□ -2.02
TY4A-HQ6Q5P6 YGR109W-BYGR109W-B 4644 nt2.42□□□□□ -2.02
TY4A-HQ6Q5P6 STH1YIL126W 4080 nt2.42□□□□□ -2.02
TY4A-HQ6Q5P6 APL1YJR005W 2103 nt2.42□□□□□ -2.02
TY4A-HQ6Q5P6 RTT101YJL047C 2529 nt2.41□□□□□ -2.02
TY4A-HQ6Q5P6 GIP3YPL137C 3831 nt2.41□□□□□ -2.02
TY4A-HQ6Q5P6 YHR131W-AYHR131W-A 246 nt2.41□□□□□ -2.02
TY4A-HQ6Q5P6 YKR075W-AYKR075W-A 270 nt2.41□□□□□ -2.02
TY4A-HQ6Q5P6 HMI1YOL095C 2121 nt2.41□□□□□ -2.02
TY4A-HQ6Q5P6 PKH2YOL100W 3246 nt2.4□□□□□ -2.02
TY4A-HQ6Q5P6 snR81snR81 201 nt2.4□□□□□ -2.03
TY4A-HQ6Q5P6 BUD2YKL092C 3315 nt2.4□□□□□ -2.03
TY4A-HQ6Q5P6 STB6YKL072W 2301 nt2.4□□□□□ -2.03
TY4A-HQ6Q5P6 INO80YGL150C 4470 nt2.39□□□□□ -2.03
TY4A-HQ6Q5P6 UBP1YDL122W 2430 nt2.39□□□□□ -2.03
TY4A-HQ6Q5P6 SSD1YDR293C 3753 nt2.38□□□□□ -2.03
TY4A-HQ6Q5P6 UTP8YGR128C 2142 nt2.38□□□□□ -2.03
TY4A-HQ6Q5P6 YIL156W-BYIL156W-B 222 nt2.38□□□□□ -2.03
TY4A-HQ6Q5P6 snR39BsnR39B 96 nt2.38□□□□□ -2.03
TY4A-HQ6Q5P6 MSH5YDL154W 2706 nt2.38□□□□□ -2.03
TY4A-HQ6Q5P6 ATG9YDL149W 2994 nt2.37□□□□□ -2.03
TY4A-HQ6Q5P6 SCD5YOR329C 2619 nt2.37□□□□□ -2.03
TY4A-HQ6Q5P6 COG4YPR105C 2586 nt2.36□□□□□ -2.03
TY4A-HQ6Q5P6 YLL020CYLL020C 306 nt2.36□□□□□ -2.03
TY4A-HQ6Q5P6 VPS8YAL002W 3825 nt2.36□□□□□ -2.03
TY4A-HQ6Q5P6 SPP41YDR464W 4308 nt2.36□□□□□ -2.03
TY4A-HQ6Q5P6 SLI15YBR156C 2097 nt2.35□□□□□ -2.03
TY4A-HQ6Q5P6 DNA2YHR164C 4569 nt2.34□□□□□ -2.03
TY4A-HQ6Q5P6 SEC63YOR254C 1992 nt2.34□□□□□ -2.03
TY4A-HQ6Q5P6 SEC16YPL085W 6588 nt2.34□□□□□ -2.03
TY4A-HQ6Q5P6 YBL039C-AYBL039C-A 84 nt2.34□□□□□ -2.03
TY4A-HQ6Q5P6 TRL1YJL087C 2484 nt2.34□□□□□ -2.04
TY4A-HQ6Q5P6 MDS3YGL197W 4464 nt2.34□□□□□ -2.04
TY4A-HQ6Q5P6 PDR11YIL013C 4236 nt2.34□□□□□ -2.04
TY4A-HQ6Q5P6 AGC1YPR021C 2709 nt2.33□□□□□ -2.04
TY4A-HQ6Q5P6 YMR175W-AYMR175W-A 195 nt2.33□□□□□ -2.04
TY4A-HQ6Q5P6 NAB6YML117W 3405 nt2.33□□□□□ -2.04
TY4A-HQ6Q5P6 YOR343W-BYOR343W-B 5313 nt2.32□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 30.1 ms