Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD3Q6PCD5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFWD3Q6PCD5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.89■□□□□ 0.94
RFWD3Q6PCD5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RFWD3Q6PCD5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.89■□□□□ 0.94
RFWD3Q6PCD5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
RFWD3Q6PCD5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFWD3Q6PCD5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFWD3Q6PCD5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFWD3Q6PCD5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFWD3Q6PCD5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 AP003097.1-201ENST00000530657 1135 ntBASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 AC007225.1-201ENST00000566331 1836 ntBASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD3Q6PCD5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 AC026366.1-201ENST00000488803 879 ntBASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 AC008403.3-201ENST00000598924 454 ntBASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.88■□□□□ 0.93
RFWD3Q6PCD5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.87■□□□□ 0.93
RFWD3Q6PCD5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.87■□□□□ 0.93
RFWD3Q6PCD5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFWD3Q6PCD5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFWD3Q6PCD5 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RFWD3Q6PCD5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.87■□□□□ 0.93
RFWD3Q6PCD5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFWD3Q6PCD5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.87■□□□□ 0.93
RFWD3Q6PCD5 SOX15-203ENST00000570788 1093 ntBASIC20.87■□□□□ 0.93
RFWD3Q6PCD5 AC006058.3-201ENST00000606217 1069 ntBASIC20.87■□□□□ 0.93
RFWD3Q6PCD5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RFWD3Q6PCD5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.87■□□□□ 0.93
RFWD3Q6PCD5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFWD3Q6PCD5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RFWD3Q6PCD5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.87■□□□□ 0.93
RFWD3Q6PCD5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFWD3Q6PCD5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 KRT18P29-201ENST00000397031 1267 ntBASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms