Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF544Q6NX49 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 AC073111.5-205ENST00000641717 521 ntBASIC18.36■□□□□ 0.53
ZNF544Q6NX49 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF544Q6NX49 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 ID1-201ENST00000376105 1233 ntBASIC18.35■□□□□ 0.53
ZNF544Q6NX49 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ZNF544Q6NX49 AC121338.2-201ENST00000622535 1744 ntBASIC18.35■□□□□ 0.53
ZNF544Q6NX49 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 CDCA4P2-201ENST00000441182 718 ntBASIC18.34■□□□□ 0.53
ZNF544Q6NX49 AC026185.1-201ENST00000445748 174 ntBASIC18.34■□□□□ 0.53
ZNF544Q6NX49 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 AC011767.1-201ENST00000617410 1153 ntBASIC18.34■□□□□ 0.53
ZNF544Q6NX49 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 BCL2-203ENST00000589955 5011 ntBASIC18.34■□□□□ 0.53
ZNF544Q6NX49 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF544Q6NX49 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.33■□□□□ 0.53
ZNF544Q6NX49 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
ZNF544Q6NX49 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF544Q6NX49 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF544Q6NX49 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ZNF544Q6NX49 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF544Q6NX49 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF544Q6NX49 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms