Protein–RNA interactions for Protein: Q58A44

PCOTH, Prostate collagen triple helix protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTHQ58A44 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
PCOTHQ58A44 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
PCOTHQ58A44 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
PCOTHQ58A44 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PCOTHQ58A44 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
PCOTHQ58A44 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC11.66□□□□□ -0.54
PCOTHQ58A44 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
PCOTHQ58A44 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PCOTHQ58A44 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
PCOTHQ58A44 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
PCOTHQ58A44 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PCOTHQ58A44 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC11.66□□□□□ -0.54
PCOTHQ58A44 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PCOTHQ58A44 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PCOTHQ58A44 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
PCOTHQ58A44 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC11.65□□□□□ -0.54
PCOTHQ58A44 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC11.65□□□□□ -0.54
PCOTHQ58A44 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC11.65□□□□□ -0.54
PCOTHQ58A44 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC11.65□□□□□ -0.54
PCOTHQ58A44 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
PCOTHQ58A44 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
PCOTHQ58A44 GXYLT1P2-201ENST00000433312 1230 ntBASIC11.65□□□□□ -0.54
PCOTHQ58A44 KRT18P5-201ENST00000436075 1291 ntBASIC11.65□□□□□ -0.54
PCOTHQ58A44 KRT18P14-201ENST00000534205 1250 ntBASIC11.65□□□□□ -0.54
PCOTHQ58A44 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC11.65□□□□□ -0.54
PCOTHQ58A44 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
PCOTHQ58A44 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
PCOTHQ58A44 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
PCOTHQ58A44 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
PCOTHQ58A44 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PCOTHQ58A44 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC11.65□□□□□ -0.55
PCOTHQ58A44 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
PCOTHQ58A44 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
PCOTHQ58A44 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
PCOTHQ58A44 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC11.65□□□□□ -0.55
PCOTHQ58A44 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
PCOTHQ58A44 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
PCOTHQ58A44 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC11.65□□□□□ -0.55
PCOTHQ58A44 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
PCOTHQ58A44 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
PCOTHQ58A44 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 USP45-205ENST00000472914 1617 ntTSL 5 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
PCOTHQ58A44 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PCOTHQ58A44 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
PCOTHQ58A44 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
PCOTHQ58A44 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
PCOTHQ58A44 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
PCOTHQ58A44 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms