Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 HTR7P1-201ENST00000538670 1336 ntBASIC23.54■■□□□ 1.36
SHROOM1Q2M3G4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.54■■□□□ 1.36
SHROOM1Q2M3G4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SHROOM1Q2M3G4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SHROOM1Q2M3G4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SHROOM1Q2M3G4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHROOM1Q2M3G4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SHROOM1Q2M3G4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHROOM1Q2M3G4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.52■■□□□ 1.36
SHROOM1Q2M3G4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHROOM1Q2M3G4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.52■■□□□ 1.36
SHROOM1Q2M3G4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.52■■□□□ 1.36
SHROOM1Q2M3G4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.52■■□□□ 1.36
SHROOM1Q2M3G4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.52■■□□□ 1.36
SHROOM1Q2M3G4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.52■■□□□ 1.36
SHROOM1Q2M3G4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC23.52■■□□□ 1.36
SHROOM1Q2M3G4 AF186192.3-201ENST00000583427 947 ntBASIC23.52■■□□□ 1.36
SHROOM1Q2M3G4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.52■■□□□ 1.36
SHROOM1Q2M3G4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SHROOM1Q2M3G4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SHROOM1Q2M3G4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.51■■□□□ 1.35
SHROOM1Q2M3G4 AL135905.2-201ENST00000584934 1404 ntBASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 AC087499.1-201ENST00000418141 1075 ntBASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 MIR4785-201ENST00000585005 73 ntBASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 KRT17P2-201ENST00000300992 1314 ntBASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHROOM1Q2M3G4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 FAM197Y1-201ENST00000421178 764 ntBASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms