Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1EQ15878 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1EQ15878 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.65■□□□□ 0.74
CACNA1EQ15878 AC005363.2-201ENST00000618631 242 ntBASIC19.65■□□□□ 0.74
CACNA1EQ15878 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1EQ15878 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1EQ15878 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1EQ15878 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1EQ15878 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.65■□□□□ 0.74
CACNA1EQ15878 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
CACNA1EQ15878 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1EQ15878 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.65■□□□□ 0.74
CACNA1EQ15878 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1EQ15878 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1EQ15878 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1EQ15878 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.64■□□□□ 0.74
CACNA1EQ15878 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA1EQ15878 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA1EQ15878 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.64■□□□□ 0.74
CACNA1EQ15878 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA1EQ15878 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA1EQ15878 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.64■□□□□ 0.74
CACNA1EQ15878 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
CACNA1EQ15878 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.64■□□□□ 0.74
CACNA1EQ15878 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1EQ15878 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1EQ15878 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1EQ15878 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CACNA1EQ15878 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CACNA1EQ15878 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1EQ15878 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CACNA1EQ15878 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.64■□□□□ 0.73
CACNA1EQ15878 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1EQ15878 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CACNA1EQ15878 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1EQ15878 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CACNA1EQ15878 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1EQ15878 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1EQ15878 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.63■□□□□ 0.73
CACNA1EQ15878 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CACNA1EQ15878 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1EQ15878 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1EQ15878 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.63■□□□□ 0.73
CACNA1EQ15878 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1EQ15878 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.62■□□□□ 0.73
CACNA1EQ15878 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.62■□□□□ 0.73
CACNA1EQ15878 UPK3BP1-201ENST00000428678 509 ntBASIC19.62■□□□□ 0.73
CACNA1EQ15878 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.62■□□□□ 0.73
CACNA1EQ15878 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1EQ15878 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
CACNA1EQ15878 DUX4L26-201ENST00000489078 1255 ntBASIC19.62■□□□□ 0.73
CACNA1EQ15878 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
CACNA1EQ15878 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.62■□□□□ 0.73
CACNA1EQ15878 WWOX-216ENST00000569818 525 ntBASIC19.62■□□□□ 0.73
CACNA1EQ15878 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CACNA1EQ15878 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.62■□□□□ 0.73
CACNA1EQ15878 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.62■□□□□ 0.73
CACNA1EQ15878 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1EQ15878 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1EQ15878 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.62■□□□□ 0.73
CACNA1EQ15878 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.62■□□□□ 0.73
CACNA1EQ15878 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.62■□□□□ 0.73
CACNA1EQ15878 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.62■□□□□ 0.73
CACNA1EQ15878 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.62■□□□□ 0.73
CACNA1EQ15878 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1EQ15878 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1EQ15878 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1EQ15878 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1EQ15878 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1EQ15878 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CACNA1EQ15878 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1EQ15878 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1EQ15878 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CACNA1EQ15878 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.61■□□□□ 0.73
CACNA1EQ15878 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1EQ15878 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1EQ15878 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1EQ15878 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.61■□□□□ 0.73
CACNA1EQ15878 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CACNA1EQ15878 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.6■□□□□ 0.73
CACNA1EQ15878 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.6■□□□□ 0.73
CACNA1EQ15878 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.6■□□□□ 0.73
CACNA1EQ15878 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.6■□□□□ 0.73
CACNA1EQ15878 AL031985.4-201ENST00000642138 673 ntBASIC19.6■□□□□ 0.73
CACNA1EQ15878 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1EQ15878 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.6■□□□□ 0.73
CACNA1EQ15878 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1EQ15878 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1EQ15878 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1EQ15878 MIR1238-201ENST00000408483 83 ntBASIC19.6■□□□□ 0.73
CACNA1EQ15878 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.6■□□□□ 0.73
CACNA1EQ15878 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.6■□□□□ 0.73
CACNA1EQ15878 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1EQ15878 AL445675.2-201ENST00000620291 557 ntBASIC19.6■□□□□ 0.73
CACNA1EQ15878 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1EQ15878 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1EQ15878 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1EQ15878 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1EQ15878 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1EQ15878 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms