Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeast

Known RBP Predictions only

Length 86 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM6	Q06406	snR128	snR128	126 nt		-0.47	□□□□□ -2.48
LSM6	Q06406	YOR248W	YOR248W	303 nt		-0.47	□□□□□ -2.48
LSM6	Q06406	YOR345C	YOR345C	351 nt		-0.47	□□□□□ -2.48
LSM6	Q06406	SBH2	YER019C-A	267 nt		-0.48	□□□□□ -2.49
LSM6	Q06406	SNU56	YDR240C	1479 nt		-0.48	□□□□□ -2.49
LSM6	Q06406	SPO21	YOL091W	1830 nt		-0.49	□□□□□ -2.49
LSM6	Q06406	PHS1	YJL097W	654 nt		-0.49	□□□□□ -2.49
LSM6	Q06406	YKL023C-A	YKL023C-A	228 nt		-0.49	□□□□□ -2.49
LSM6	Q06406	YOL160W	YOL160W	342 nt		-0.49	□□□□□ -2.49
LSM6	Q06406	YPR096C	YPR096C	303 nt		-0.49	□□□□□ -2.49
LSM6	Q06406	RAD34	YDR314C	2079 nt		-0.49	□□□□□ -2.49
LSM6	Q06406	YEL073C	YEL073C	324 nt		-0.51	□□□□□ -2.49
LSM6	Q06406	NIP1	YMR309C	2439 nt		-0.51	□□□□□ -2.49
LSM6	Q06406	TFB5	YDR079C-A	219 nt		-0.52	□□□□□ -2.49
LSM6	Q06406	YJR011C	YJR011C	786 nt		-0.52	□□□□□ -2.49
LSM6	Q06406	PBI2	YNL015W	228 nt		-0.52	□□□□□ -2.49
LSM6	Q06406	ILM1	YJR118C	612 nt		-0.53	□□□□□ -2.49
LSM6	Q06406	YLR101C	YLR101C	396 nt		-0.53	□□□□□ -2.49
LSM6	Q06406	snR72	snR72	98 nt		-0.54	□□□□□ -2.5
LSM6	Q06406	EMC4	YGL231C	573 nt		-0.54	□□□□□ -2.5
LSM6	Q06406	YIR044C	YIR044C	186 nt		-0.54	□□□□□ -2.5
LSM6	Q06406	YPL261C	YPL261C	309 nt		-0.54	□□□□□ -2.5
LSM6	Q06406	YBR206W	YBR206W	324 nt		-0.54	□□□□□ -2.5
LSM6	Q06406	RAD61	YDR014W	1944 nt		-0.54	□□□□□ -2.5
LSM6	Q06406	YGL239C	YGL239C	315 nt		-0.55	□□□□□ -2.5
LSM6	Q06406	YLR217W	YLR217W	324 nt		-0.55	□□□□□ -2.5
LSM6	Q06406	YML108W	YML108W	318 nt		-0.55	□□□□□ -2.5
LSM6	Q06406	YOL014W	YOL014W	375 nt		-0.55	□□□□□ -2.5
LSM6	Q06406	BUD26	YDR241W	288 nt		-0.56	□□□□□ -2.5
LSM6	Q06406	SEC10	YLR166C	2616 nt		-0.57	□□□□□ -2.5
LSM6	Q06406	YHL046W-A	YHL046W-A	327 nt		-0.57	□□□□□ -2.5
LSM6	Q06406	DCP1	YOL149W	696 nt		-0.57	□□□□□ -2.5
LSM6	Q06406	snR5	snR5	204 nt		-0.58	□□□□□ -2.5
LSM6	Q06406	tN(GUU)Q	tN(GUU)Q	71 nt		-0.58	□□□□□ -2.5
LSM6	Q06406	YGR164W	YGR164W	336 nt		-0.58	□□□□□ -2.5
LSM6	Q06406	CUP1-1	YHR053C	186 nt		-0.58	□□□□□ -2.5
LSM6	Q06406	CUP1-2	YHR055C	186 nt		-0.58	□□□□□ -2.5
LSM6	Q06406	YGR228W	YGR228W	345 nt		-0.59	□□□□□ -2.5
LSM6	Q06406	YLR171W	YLR171W	390 nt		-0.59	□□□□□ -2.5
LSM6	Q06406	YPR039W	YPR039W	336 nt		-0.59	□□□□□ -2.5
LSM6	Q06406	YJR141W	YJR141W	1044 nt		-0.6	□□□□□ -2.51
LSM6	Q06406	STF2	YGR008C	255 nt		-0.61	□□□□□ -2.51
LSM6	Q06406	YHR131W-A	YHR131W-A	246 nt		-0.61	□□□□□ -2.51
LSM6	Q06406	YJL007C	YJL007C	315 nt		-0.61	□□□□□ -2.51
LSM6	Q06406	APQ13	YJL075C	417 nt		-0.61	□□□□□ -2.51
LSM6	Q06406	HTB2	YBL002W	396 nt		-0.61	□□□□□ -2.51
LSM6	Q06406	UBS1	YBR165W	834 nt		-0.61	□□□□□ -2.51
LSM6	Q06406	CMC1	YKL137W	336 nt		-0.62	□□□□□ -2.51
LSM6	Q06406	YKL202W	YKL202W	582 nt		-0.62	□□□□□ -2.51
LSM6	Q06406	PTP2	YOR208W	2253 nt		-0.62	□□□□□ -2.51
LSM6	Q06406	PRP39	YML046W	1890 nt		-0.63	□□□□□ -2.51
LSM6	Q06406	YBR063C	YBR063C	1215 nt		-0.63	□□□□□ -2.51
LSM6	Q06406	MRPL32	YCR003W	552 nt		-0.64	□□□□□ -2.51
LSM6	Q06406	YIR030W-A	YIR030W-A	384 nt		-0.65	□□□□□ -2.51
LSM6	Q06406	YOL029C	YOL029C	606 nt		-0.65	□□□□□ -2.51
LSM6	Q06406	BUL2	YML111W	2763 nt		-0.65	□□□□□ -2.51
LSM6	Q06406	NIP100	YPL174C	2607 nt		-0.66	□□□□□ -2.51
LSM6	Q06406	YER135C	YER135C	393 nt		-0.66	□□□□□ -2.52
LSM6	Q06406	YLL006W-A	YLL006W-A	177 nt		-0.66	□□□□□ -2.52
LSM6	Q06406	YBL062W	YBL062W	381 nt		-0.66	□□□□□ -2.52
LSM6	Q06406	snR46	snR46	197 nt		-0.66	□□□□□ -2.52
LSM6	Q06406	snR51	snR51	107 nt		-0.66	□□□□□ -2.52
LSM6	Q06406	YDL185C-A	YDL185C-A	228 nt		-0.67	□□□□□ -2.52
LSM6	Q06406	YIL066W-A	YIL066W-A	444 nt		-0.67	□□□□□ -2.52
LSM6	Q06406	YBL107W-A	YBL107W-A	105 nt		-0.67	□□□□□ -2.52
LSM6	Q06406	URB1	YKL014C	5295 nt		-0.68	□□□□□ -2.52
LSM6	Q06406	IPP1	YBR011C	864 nt		-0.69	□□□□□ -2.52
LSM6	Q06406	YPL205C	YPL205C	345 nt		-0.69	□□□□□ -2.52
LSM6	Q06406	ECL1	YGR146C	636 nt		-0.7	□□□□□ -2.52
LSM6	Q06406	SEM1	YDR363W-A	270 nt		-0.71	□□□□□ -2.52
LSM6	Q06406	HUR1	YGL168W	333 nt		-0.71	□□□□□ -2.52
LSM6	Q06406	RPS20	YHL015W	366 nt		-0.71	□□□□□ -2.52
LSM6	Q06406	HUG1	YML058W-A	207 nt		-0.71	□□□□□ -2.52
LSM6	Q06406	YCR001W	YCR001W	315 nt		-0.72	□□□□□ -2.52
LSM6	Q06406	YCR018C-A	YCR018C-A	255 nt		-0.72	□□□□□ -2.52
LSM6	Q06406	YGR115C	YGR115C	780 nt		-0.72	□□□□□ -2.52
LSM6	Q06406	ATG31	YDR022C	591 nt		-0.73	□□□□□ -2.53
LSM6	Q06406	SDH7	YDR511W	402 nt		-0.73	□□□□□ -2.53
LSM6	Q06406	YMR254C	YMR254C	309 nt		-0.73	□□□□□ -2.53
LSM6	Q06406	YMR307C-A	YMR307C-A	195 nt		-0.73	□□□□□ -2.53
LSM6	Q06406	snR9	snR9	187 nt		-0.74	□□□□□ -2.53
LSM6	Q06406	SCEI	Q0160	708 nt		-0.74	□□□□□ -2.53
LSM6	Q06406	YPL225W	YPL225W	441 nt		-0.74	□□□□□ -2.53
LSM6	Q06406	POP7	YBR167C	423 nt		-0.74	□□□□□ -2.53
LSM6	Q06406	DIE2	YGR227W	1578 nt		-0.74	□□□□□ -2.53
LSM6	Q06406	TIM13	YGR181W	318 nt		-0.75	□□□□□ -2.53
LSM6	Q06406	YNL319W	YNL319W	441 nt		-0.75	□□□□□ -2.53
LSM6	Q06406	YPL182C	YPL182C	384 nt		-0.75	□□□□□ -2.53
LSM6	Q06406	YPR170W-A	YPR170W-A	186 nt		-0.75	□□□□□ -2.53
LSM6	Q06406	SLX9	YGR081C	633 nt		-0.76	□□□□□ -2.53
LSM6	Q06406	RPF1	YHR088W	888 nt		-0.76	□□□□□ -2.53
LSM6	Q06406	BER1	YLR412W	825 nt		-0.76	□□□□□ -2.53
LSM6	Q06406	YOR011W-A	YOR011W-A	207 nt		-0.76	□□□□□ -2.53
LSM6	Q06406	SGF11	YPL047W	300 nt		-0.76	□□□□□ -2.53
LSM6	Q06406	YGR025W	YGR025W	303 nt		-0.78	□□□□□ -2.53
LSM6	Q06406	YPT6	YLR262C	648 nt		-0.79	□□□□□ -2.54
LSM6	Q06406	SVS1	YPL163C	783 nt		-0.79	□□□□□ -2.54
LSM6	Q06406	YPR092W	YPR092W	306 nt		-0.79	□□□□□ -2.54
LSM6	Q06406	YCR022C	YCR022C	345 nt		-0.81	□□□□□ -2.54
LSM6	Q06406	MND1	YGL183C	660 nt		-0.81	□□□□□ -2.54

Retrieved 100 of 7,029 protein–RNA pairs in 30.6 ms