Protein–RNA interactions for Protein: Q06287

EMG1, Ribosomal RNA small subunit methyltransferase NEP1, yeastyeast

Known RBP Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
EMG1Q06287 TRL1YJL087C 2484 nt2.49□□□□□ -2.01
EMG1Q06287 FAR11YNL127W 2862 nt2.49□□□□□ -2.01
EMG1Q06287 AGC1YPR021C 2709 nt2.49□□□□□ -2.01
EMG1Q06287 BNR1YIL159W 4128 nt2.49□□□□□ -2.01
EMG1Q06287 PKH2YOL100W 3246 nt2.49□□□□□ -2.01
EMG1Q06287 DNA2YHR164C 4569 nt2.49□□□□□ -2.01
EMG1Q06287 UBR1YGR184C 5853 nt2.48□□□□□ -2.01
EMG1Q06287 CDC60YPL160W 3273 nt2.48□□□□□ -2.01
EMG1Q06287 TTI1YKL033W 3117 nt2.48□□□□□ -2.01
EMG1Q06287 YJL026C-AYJL026C-A 222 nt2.48□□□□□ -2.01
EMG1Q06287 PET309YLR067C 2898 nt2.48□□□□□ -2.01
EMG1Q06287 CTR9YOL145C 3234 nt2.47□□□□□ -2.01
EMG1Q06287 NAB6YML117W 3405 nt2.47□□□□□ -2.01
EMG1Q06287 snR70snR70 164 nt2.46□□□□□ -2.02
EMG1Q06287 YIL002W-AYIL002W-A 210 nt2.46□□□□□ -2.02
EMG1Q06287 TOP2YNL088W 4287 nt2.45□□□□□ -2.02
EMG1Q06287 APL1YJR005W 2103 nt2.45□□□□□ -2.02
EMG1Q06287 NUM1YDR150W 8247 nt2.45□□□□□ -2.02
EMG1Q06287 IRE1YHR079C 3348 nt2.45□□□□□ -2.02
EMG1Q06287 SOM1YEL059C-A 225 nt2.45□□□□□ -2.02
EMG1Q06287 FKS3YMR306W 5358 nt2.45□□□□□ -2.02
EMG1Q06287 CHS6YJL099W 2241 nt2.45□□□□□ -2.02
EMG1Q06287 SLI15YBR156C 2097 nt2.45□□□□□ -2.02
EMG1Q06287 SEC26YDR238C 2922 nt2.45□□□□□ -2.02
EMG1Q06287 NEW1YPL226W 3591 nt2.44□□□□□ -2.02
EMG1Q06287 YPP1YGR198W 2454 nt2.44□□□□□ -2.02
EMG1Q06287 SYH1YPL105C 2550 nt2.44□□□□□ -2.02
EMG1Q06287 COG4YPR105C 2586 nt2.43□□□□□ -2.02
EMG1Q06287 SCP160YJL080C 3669 nt2.43□□□□□ -2.02
EMG1Q06287 TRA1YHR099W 11235 nt2.43□□□□□ -2.02
EMG1Q06287 ARP8YOR141C 2646 nt2.42□□□□□ -2.02
EMG1Q06287 YMR175W-AYMR175W-A 195 nt2.42□□□□□ -2.02
EMG1Q06287 YPL150WYPL150W 2706 nt2.42□□□□□ -2.02
EMG1Q06287 MLH1YMR167W 2310 nt2.42□□□□□ -2.02
EMG1Q06287 SGM1YJR134C 2124 nt2.41□□□□□ -2.02
EMG1Q06287 FRK1YPL141C 2598 nt2.41□□□□□ -2.02
EMG1Q06287 GIP3YPL137C 3831 nt2.4□□□□□ -2.02
EMG1Q06287 PDR3YBL005W 2931 nt2.4□□□□□ -2.03
EMG1Q06287 YDL118WYDL118W 381 nt2.39□□□□□ -2.03
EMG1Q06287 RPL37BYDR500C 267 nt2.39□□□□□ -2.03
EMG1Q06287 YKR075W-AYKR075W-A 270 nt2.39□□□□□ -2.03
EMG1Q06287 YOR055WYOR055W 435 nt2.39□□□□□ -2.03
EMG1Q06287 YLL054CYLL054C 2532 nt2.39□□□□□ -2.03
EMG1Q06287 UBP1YDL122W 2430 nt2.39□□□□□ -2.03
EMG1Q06287 YGR109W-BYGR109W-B 4644 nt2.38□□□□□ -2.03
EMG1Q06287 SAP185YJL098W 3177 nt2.38□□□□□ -2.03
EMG1Q06287 KRE33YNL132W 3171 nt2.38□□□□□ -2.03
EMG1Q06287 ADR1YDR216W 3972 nt2.38□□□□□ -2.03
EMG1Q06287 RTT107YHR154W 3213 nt2.38□□□□□ -2.03
EMG1Q06287 YGL041C-BYGL041C-B 183 nt2.37□□□□□ -2.03
EMG1Q06287 YGL182CYGL182C 324 nt2.37□□□□□ -2.03
EMG1Q06287 STF2YGR008C 255 nt2.37□□□□□ -2.03
EMG1Q06287 PDR1YGL013C 3207 nt2.37□□□□□ -2.03
EMG1Q06287 YNL144CYNL144C 2223 nt2.37□□□□□ -2.03
EMG1Q06287 CHC1YGL206C 4962 nt2.37□□□□□ -2.03
EMG1Q06287 RAV1YJR033C 4074 nt2.37□□□□□ -2.03
EMG1Q06287 UTP8YGR128C 2142 nt2.36□□□□□ -2.03
EMG1Q06287 UBP15YMR304W 3693 nt2.36□□□□□ -2.03
EMG1Q06287 SSD1YDR293C 3753 nt2.36□□□□□ -2.03
EMG1Q06287 YOR343W-BYOR343W-B 5313 nt2.35□□□□□ -2.03
EMG1Q06287 SPF1YEL031W 3648 nt2.35□□□□□ -2.03
EMG1Q06287 YDL206WYDL206W 2289 nt2.35□□□□□ -2.03
EMG1Q06287 NUP170YBL079W 4509 nt2.35□□□□□ -2.03
EMG1Q06287 LHS1YKL073W 2646 nt2.34□□□□□ -2.03
EMG1Q06287 YCR087C-AYCR087C-A 462 nt2.34□□□□□ -2.03
EMG1Q06287 SVL3YPL032C 2478 nt2.34□□□□□ -2.04
EMG1Q06287 RTT101YJL047C 2529 nt2.34□□□□□ -2.04
EMG1Q06287 IRA2YOL081W 9240 nt2.33□□□□□ -2.04
EMG1Q06287 IRC8YJL051W 2469 nt2.33□□□□□ -2.04
EMG1Q06287 tW(CCA)G1tW(CCA)G1 72 nt2.33□□□□□ -2.04
EMG1Q06287 tW(CCA)G2tW(CCA)G2 72 nt2.33□□□□□ -2.04
EMG1Q06287 tW(CCA)JtW(CCA)J 72 nt2.33□□□□□ -2.04
EMG1Q06287 tW(CCA)KtW(CCA)K 72 nt2.33□□□□□ -2.04
EMG1Q06287 tW(CCA)MtW(CCA)M 72 nt2.33□□□□□ -2.04
EMG1Q06287 tW(CCA)PtW(CCA)P 72 nt2.33□□□□□ -2.04
EMG1Q06287 STE11YLR362W 2154 nt2.33□□□□□ -2.04
EMG1Q06287 YEF3YLR249W 3135 nt2.33□□□□□ -2.04
EMG1Q06287 YLL020CYLL020C 306 nt2.32□□□□□ -2.04
EMG1Q06287 YAL067W-AYAL067W-A 228 nt2.32□□□□□ -2.04
EMG1Q06287 GCN2YDR283C 4980 nt2.32□□□□□ -2.04
EMG1Q06287 REV3YPL167C 4515 nt2.32□□□□□ -2.04
EMG1Q06287 PSD2YGR170W 3417 nt2.31□□□□□ -2.04
EMG1Q06287 PDR11YIL013C 4236 nt2.31□□□□□ -2.04
EMG1Q06287 SEC16YPL085W 6588 nt2.3□□□□□ -2.04
EMG1Q06287 STH1YIL126W 4080 nt2.29□□□□□ -2.04
EMG1Q06287 SEY1YOR165W 2331 nt2.29□□□□□ -2.04
EMG1Q06287 TIM9YEL020W-A 264 nt2.29□□□□□ -2.04
EMG1Q06287 YGL123C-AYGL123C-A 231 nt2.29□□□□□ -2.04
EMG1Q06287 VPS13YLL040C 9435 nt2.28□□□□□ -2.04
EMG1Q06287 QCR9YGR183C 201 nt2.28□□□□□ -2.04
EMG1Q06287 YKL100W-AYKL100W-A 90 nt2.28□□□□□ -2.04
EMG1Q06287 UFD2YDL190C 2886 nt2.28□□□□□ -2.04
EMG1Q06287 IST2YBR086C 2841 nt2.28□□□□□ -2.04
EMG1Q06287 SFB2YNL049C 2631 nt2.28□□□□□ -2.04
EMG1Q06287 YIL142C-AYIL142C-A 333 nt2.27□□□□□ -2.05
EMG1Q06287 TRM3YDL112W 4311 nt2.27□□□□□ -2.05
EMG1Q06287 RSM22YKL155C 1887 nt2.26□□□□□ -2.05
EMG1Q06287 BFR2YDR299W 1605 nt2.26□□□□□ -2.05
EMG1Q06287 DNF1YER166W 4716 nt2.26□□□□□ -2.05
EMG1Q06287 SPO24YPR036W-A 204 nt2.25□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 8.2 ms