Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 PIP2YOR363C 2991 nt2.17□□□□□ -2.06
SSL1Q04673 IST2YBR086C 2841 nt2.17□□□□□ -2.06
SSL1Q04673 snR85snR85 171 nt2.17□□□□□ -2.06
SSL1Q04673 YDL196WYDL196W 330 nt2.17□□□□□ -2.06
SSL1Q04673 YHR210CYHR210C 1026 nt2.17□□□□□ -2.06
SSL1Q04673 RPL31AYDL075W 342 nt2.16□□□□□ -2.06
SSL1Q04673 FIG4YNL325C 2640 nt2.16□□□□□ -2.06
SSL1Q04673 YOL098CYOL098C 3114 nt2.15□□□□□ -2.06
SSL1Q04673 PMP1YCR024C-A 123 nt2.15□□□□□ -2.07
SSL1Q04673 PAU3YCR104W 375 nt2.15□□□□□ -2.07
SSL1Q04673 YIL020C-AYIL020C-A 339 nt2.15□□□□□ -2.07
SSL1Q04673 YLL019W-AYLL019W-A 93 nt2.15□□□□□ -2.07
SSL1Q04673 RGA1YOR127W 3024 nt2.15□□□□□ -2.07
SSL1Q04673 SXM1YDR395W 2835 nt2.15□□□□□ -2.07
SSL1Q04673 PIG1YLR273C 1947 nt2.15□□□□□ -2.07
SSL1Q04673 AGC1YPR021C 2709 nt2.14□□□□□ -2.07
SSL1Q04673 YKR075W-AYKR075W-A 270 nt2.14□□□□□ -2.07
SSL1Q04673 IRE1YHR079C 3348 nt2.14□□□□□ -2.07
SSL1Q04673 RTT101YJL047C 2529 nt2.14□□□□□ -2.07
SSL1Q04673 UTP22YGR090W 3714 nt2.13□□□□□ -2.07
SSL1Q04673 RPL37BYDR500C 267 nt2.13□□□□□ -2.07
SSL1Q04673 GIP3YPL137C 3831 nt2.13□□□□□ -2.07
SSL1Q04673 PRP42YDR235W 1635 nt2.13□□□□□ -2.07
SSL1Q04673 STH1YIL126W 4080 nt2.12□□□□□ -2.07
SSL1Q04673 HAL9YOL089C 3093 nt2.12□□□□□ -2.07
SSL1Q04673 SAP185YJL098W 3177 nt2.12□□□□□ -2.07
SSL1Q04673 YJL052C-AYJL052C-A 120 nt2.12□□□□□ -2.07
SSL1Q04673 SBE22YHR103W 2559 nt2.12□□□□□ -2.07
SSL1Q04673 SLD3YGL113W 2007 nt2.12□□□□□ -2.07
SSL1Q04673 COY1YKL179C 2040 nt2.12□□□□□ -2.07
SSL1Q04673 TDA9YML081W 3756 nt2.11□□□□□ -2.07
SSL1Q04673 YCR087C-AYCR087C-A 462 nt2.11□□□□□ -2.07
SSL1Q04673 snR48snR48 113 nt2.11□□□□□ -2.07
SSL1Q04673 HUG1YML058W-A 207 nt2.1□□□□□ -2.07
SSL1Q04673 AHC1YOR023C 1701 nt2.1□□□□□ -2.07
SSL1Q04673 PBY1YBR094W 2262 nt2.1□□□□□ -2.07
SSL1Q04673 FRK1YPL141C 2598 nt2.09□□□□□ -2.07
SSL1Q04673 TOR2YKL203C 7425 nt2.08□□□□□ -2.08
SSL1Q04673 KOG1YHR186C 4674 nt2.08□□□□□ -2.08
SSL1Q04673 ALK1YGL021W 2283 nt2.08□□□□□ -2.08
SSL1Q04673 INO80YGL150C 4470 nt2.08□□□□□ -2.08
SSL1Q04673 BRE1YDL074C 2103 nt2.08□□□□□ -2.08
SSL1Q04673 IRC20YLR247C 4671 nt2.08□□□□□ -2.08
SSL1Q04673 YDR521WYDR521W 336 nt2.07□□□□□ -2.08
SSL1Q04673 YBR221W-AYBR221W-A 105 nt2.07□□□□□ -2.08
SSL1Q04673 FKS1YLR342W 5631 nt2.07□□□□□ -2.08
SSL1Q04673 MYO4YAL029C 4416 nt2.07□□□□□ -2.08
SSL1Q04673 UFD4YKL010C 4452 nt2.07□□□□□ -2.08
SSL1Q04673 STF2YGR008C 255 nt2.06□□□□□ -2.08
SSL1Q04673 SEY1YOR165W 2331 nt2.06□□□□□ -2.08
SSL1Q04673 PKH2YOL100W 3246 nt2.05□□□□□ -2.08
SSL1Q04673 IFH1YLR223C 3258 nt2.05□□□□□ -2.08
SSL1Q04673 SLI15YBR156C 2097 nt2.05□□□□□ -2.08
SSL1Q04673 ATG9YDL149W 2994 nt2.04□□□□□ -2.08
SSL1Q04673 YMR175W-AYMR175W-A 195 nt2.04□□□□□ -2.08
SSL1Q04673 DGR1YNL130C-A 147 nt2.03□□□□□ -2.08
SSL1Q04673 HER1YOR227W 3741 nt2.03□□□□□ -2.08
SSL1Q04673 YNL144CYNL144C 2223 nt2.03□□□□□ -2.08
SSL1Q04673 CHC1YGL206C 4962 nt2.03□□□□□ -2.08
SSL1Q04673 CCH1YGR217W 6120 nt2.02□□□□□ -2.09
SSL1Q04673 COG4YPR105C 2586 nt2.02□□□□□ -2.09
SSL1Q04673 YDL118WYDL118W 381 nt2.01□□□□□ -2.09
SSL1Q04673 YBL053WYBL053W 375 nt2.01□□□□□ -2.09
SSL1Q04673 SEC63YOR254C 1992 nt2.01□□□□□ -2.09
SSL1Q04673 YJR039WYJR039W 3366 nt2.01□□□□□ -2.09
SSL1Q04673 YHL015W-AYHL015W-A 84 nt2□□□□□ -2.09
SSL1Q04673 MGA2YIR033W 3342 nt2□□□□□ -2.09
SSL1Q04673 SAC3YDR159W 3906 nt1.99□□□□□ -2.09
SSL1Q04673 PDR8YLR266C 2106 nt1.99□□□□□ -2.09
SSL1Q04673 GCN2YDR283C 4980 nt1.99□□□□□ -2.09
SSL1Q04673 USO1YDL058W 5373 nt1.99□□□□□ -2.09
SSL1Q04673 YHR214C-BYHR214C-B 5382 nt1.99□□□□□ -2.09
SSL1Q04673 YBR206WYBR206W 324 nt1.99□□□□□ -2.09
SSL1Q04673 SPP41YDR464W 4308 nt1.99□□□□□ -2.09
SSL1Q04673 FAB1YFR019W 6837 nt1.99□□□□□ -2.09
SSL1Q04673 SFB2YNL049C 2631 nt1.99□□□□□ -2.09
SSL1Q04673 YOR343W-BYOR343W-B 5313 nt1.98□□□□□ -2.09
SSL1Q04673 ADR1YDR216W 3972 nt1.98□□□□□ -2.09
SSL1Q04673 MSH6YDR097C 3729 nt1.98□□□□□ -2.09
SSL1Q04673 TRM3YDL112W 4311 nt1.97□□□□□ -2.09
SSL1Q04673 YDR354C-AYDR354C-A 144 nt1.97□□□□□ -2.09
SSL1Q04673 YOR102WYOR102W 351 nt1.97□□□□□ -2.09
SSL1Q04673 YPL044CYPL044C 549 nt1.97□□□□□ -2.09
SSL1Q04673 GYP5YPL249C 2685 nt1.97□□□□□ -2.09
SSL1Q04673 HSL1YKL101W 4557 nt1.97□□□□□ -2.09
SSL1Q04673 UTP21YLR409C 2820 nt1.96□□□□□ -2.1
SSL1Q04673 YMR045CYMR045C 5268 nt1.96□□□□□ -2.1
SSL1Q04673 YER172C-AYER172C-A 381 nt1.96□□□□□ -2.1
SSL1Q04673 TMA7YLR262C-A 195 nt1.96□□□□□ -2.1
SSL1Q04673 RPS30BYOR182C 192 nt1.96□□□□□ -2.1
SSL1Q04673 CTF4YPR135W 2784 nt1.96□□□□□ -2.1
SSL1Q04673 HIR3YJR140C 4947 nt1.95□□□□□ -2.1
SSL1Q04673 YJL026C-AYJL026C-A 222 nt1.95□□□□□ -2.1
SSL1Q04673 APL1YJR005W 2103 nt1.95□□□□□ -2.1
SSL1Q04673 PAA1YDR071C 576 nt1.94□□□□□ -2.1
SSL1Q04673 YIL134C-AYIL134C-A 204 nt1.94□□□□□ -2.1
SSL1Q04673 YOR314W-AYOR314W-A 111 nt1.94□□□□□ -2.1
SSL1Q04673 SPO24YPR036W-A 204 nt1.93□□□□□ -2.1
SSL1Q04673 TTI1YKL033W 3117 nt1.93□□□□□ -2.1
SSL1Q04673 PEP1YBL017C 4740 nt1.92□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 25 ms