Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NKX6-1P78426 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.65■□□□□ 0.42
NKX6-1P78426 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-1P78426 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
NKX6-1P78426 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-1P78426 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-1P78426 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-1P78426 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.65■□□□□ 0.42
NKX6-1P78426 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.65■□□□□ 0.42
NKX6-1P78426 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-1P78426 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
NKX6-1P78426 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
NKX6-1P78426 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.64■□□□□ 0.41
NKX6-1P78426 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.64■□□□□ 0.41
NKX6-1P78426 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.64■□□□□ 0.41
NKX6-1P78426 FAM210CP-201ENST00000445714 574 ntBASIC17.64■□□□□ 0.41
NKX6-1P78426 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.64■□□□□ 0.41
NKX6-1P78426 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.64■□□□□ 0.41
NKX6-1P78426 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.64■□□□□ 0.41
NKX6-1P78426 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NKX6-1P78426 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.64■□□□□ 0.41
NKX6-1P78426 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.64■□□□□ 0.41
NKX6-1P78426 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NKX6-1P78426 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.64■□□□□ 0.41
NKX6-1P78426 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-1P78426 AC087633.2-202ENST00000565166 1439 ntBASIC17.64■□□□□ 0.41
NKX6-1P78426 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-1P78426 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-1P78426 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-1P78426 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-1P78426 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-1P78426 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-1P78426 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
NKX6-1P78426 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.63■□□□□ 0.41
NKX6-1P78426 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-1P78426 AC211429.1-201ENST00000415277 523 ntBASIC17.63■□□□□ 0.41
NKX6-1P78426 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NKX6-1P78426 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-1P78426 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.63■□□□□ 0.41
NKX6-1P78426 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.63■□□□□ 0.41
NKX6-1P78426 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.63■□□□□ 0.41
NKX6-1P78426 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
NKX6-1P78426 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
NKX6-1P78426 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-1P78426 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
NKX6-1P78426 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NKX6-1P78426 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NKX6-1P78426 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-1P78426 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NKX6-1P78426 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NKX6-1P78426 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-1P78426 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NKX6-1P78426 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-1P78426 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-1P78426 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.62■□□□□ 0.41
NKX6-1P78426 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-1P78426 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.62■□□□□ 0.41
NKX6-1P78426 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.62■□□□□ 0.41
NKX6-1P78426 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-1P78426 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.62■□□□□ 0.41
NKX6-1P78426 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
NKX6-1P78426 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NKX6-1P78426 SNORA78-201ENST00000459373 127 ntBASIC17.62■□□□□ 0.41
NKX6-1P78426 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.62■□□□□ 0.41
NKX6-1P78426 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-1P78426 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-1P78426 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
NKX6-1P78426 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-1P78426 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.62■□□□□ 0.41
NKX6-1P78426 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.62■□□□□ 0.41
NKX6-1P78426 Z99916.2-201ENST00000604037 246 ntBASIC17.62■□□□□ 0.41
NKX6-1P78426 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-1P78426 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NKX6-1P78426 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
NKX6-1P78426 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-1P78426 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-1P78426 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-1P78426 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NKX6-1P78426 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NKX6-1P78426 AC121338.2-201ENST00000622535 1744 ntBASIC17.61■□□□□ 0.41
NKX6-1P78426 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.61■□□□□ 0.41
NKX6-1P78426 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms