Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CNTNAP1P78357 LIN28AP1-201ENST00000429574 405 ntBASIC24.07■■□□□ 1.44
CNTNAP1P78357 PP7080-204ENST00000510714 601 ntTSL 3 BASIC24.07■■□□□ 1.44
CNTNAP1P78357 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
CNTNAP1P78357 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC24.07■■□□□ 1.44
CNTNAP1P78357 CLN6-221ENST00000637494 765 ntTSL 5 BASIC24.07■■□□□ 1.44
CNTNAP1P78357 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC24.07■■□□□ 1.44
CNTNAP1P78357 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CNTNAP1P78357 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CNTNAP1P78357 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CNTNAP1P78357 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC24.07■■□□□ 1.44
CNTNAP1P78357 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.07■■□□□ 1.44
CNTNAP1P78357 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CNTNAP1P78357 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CNTNAP1P78357 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC24.06■■□□□ 1.44
CNTNAP1P78357 LINC01238-205ENST00000567549 1107 ntBASIC24.06■■□□□ 1.44
CNTNAP1P78357 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC24.06■■□□□ 1.44
CNTNAP1P78357 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC24.06■■□□□ 1.44
CNTNAP1P78357 MYC-208ENST00000641036 567 ntBASIC24.06■■□□□ 1.44
CNTNAP1P78357 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.06■■□□□ 1.44
CNTNAP1P78357 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC24.06■■□□□ 1.44
CNTNAP1P78357 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
CNTNAP1P78357 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.06■■□□□ 1.44
CNTNAP1P78357 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.06■■□□□ 1.44
CNTNAP1P78357 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CNTNAP1P78357 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CNTNAP1P78357 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CNTNAP1P78357 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.05■■□□□ 1.44
CNTNAP1P78357 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CNTNAP1P78357 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CNTNAP1P78357 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
CNTNAP1P78357 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC24.05■■□□□ 1.44
CNTNAP1P78357 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC24.05■■□□□ 1.44
CNTNAP1P78357 ATP5G1P1-201ENST00000448724 379 ntBASIC24.05■■□□□ 1.44
CNTNAP1P78357 AC063952.2-201ENST00000498792 1227 ntBASIC24.05■■□□□ 1.44
CNTNAP1P78357 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC24.05■■□□□ 1.44
CNTNAP1P78357 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CNTNAP1P78357 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CNTNAP1P78357 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CNTNAP1P78357 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CNTNAP1P78357 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
CNTNAP1P78357 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.04■■□□□ 1.44
CNTNAP1P78357 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CNTNAP1P78357 COPE-203ENST00000351079 907 ntTSL 2 BASIC24.04■■□□□ 1.44
CNTNAP1P78357 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC24.04■■□□□ 1.44
CNTNAP1P78357 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CNTNAP1P78357 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CNTNAP1P78357 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC24.04■■□□□ 1.44
CNTNAP1P78357 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CNTNAP1P78357 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC24.04■■□□□ 1.44
CNTNAP1P78357 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CNTNAP1P78357 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CNTNAP1P78357 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CNTNAP1P78357 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.04■■□□□ 1.44
CNTNAP1P78357 KRT8P36-201ENST00000489121 1440 ntBASIC24.04■■□□□ 1.44
CNTNAP1P78357 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CNTNAP1P78357 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CNTNAP1P78357 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CNTNAP1P78357 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC24.03■■□□□ 1.44
CNTNAP1P78357 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC24.03■■□□□ 1.44
CNTNAP1P78357 AC023632.3-201ENST00000521633 145 ntBASIC24.03■■□□□ 1.44
CNTNAP1P78357 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC24.03■■□□□ 1.44
CNTNAP1P78357 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC24.03■■□□□ 1.44
CNTNAP1P78357 AL121829.2-201ENST00000620908 328 ntBASIC24.03■■□□□ 1.44
CNTNAP1P78357 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.03■■□□□ 1.44
CNTNAP1P78357 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CNTNAP1P78357 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CNTNAP1P78357 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC24.03■■□□□ 1.44
CNTNAP1P78357 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CNTNAP1P78357 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.03■■□□□ 1.44
CNTNAP1P78357 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CNTNAP1P78357 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CNTNAP1P78357 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC24.03■■□□□ 1.44
CNTNAP1P78357 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC24.03■■□□□ 1.44
CNTNAP1P78357 AK4P3-201ENST00000418260 669 ntBASIC24.03■■□□□ 1.44
CNTNAP1P78357 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC24.03■■□□□ 1.44
CNTNAP1P78357 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC24.03■■□□□ 1.44
CNTNAP1P78357 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.03■■□□□ 1.44
CNTNAP1P78357 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CNTNAP1P78357 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC24.03■■□□□ 1.44
CNTNAP1P78357 MIR2861-201ENST00000636310 90 ntBASIC24.03■■□□□ 1.44
CNTNAP1P78357 AP000550.4-202ENST00000639755 178 ntBASIC24.03■■□□□ 1.44
CNTNAP1P78357 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CNTNAP1P78357 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CNTNAP1P78357 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CNTNAP1P78357 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CNTNAP1P78357 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CNTNAP1P78357 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC24.02■■□□□ 1.44
CNTNAP1P78357 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CNTNAP1P78357 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CNTNAP1P78357 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CNTNAP1P78357 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CNTNAP1P78357 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC24.02■■□□□ 1.44
CNTNAP1P78357 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CNTNAP1P78357 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC24.02■■□□□ 1.44
CNTNAP1P78357 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CNTNAP1P78357 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC24.02■■□□□ 1.44
CNTNAP1P78357 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC24.02■■□□□ 1.44
CNTNAP1P78357 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC24.02■■□□□ 1.44
CNTNAP1P78357 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms