Protein–RNA interactions for Protein: P78333

GPC5, Glypican-5, humanhuman

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5P78333 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GPC5P78333 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
GPC5P78333 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GPC5P78333 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.69■■□□□ 1.06
GPC5P78333 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GPC5P78333 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GPC5P78333 LSM12P1-201ENST00000411836 588 ntBASIC21.69■■□□□ 1.06
GPC5P78333 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
GPC5P78333 AP003097.1-201ENST00000530657 1135 ntBASIC21.69■■□□□ 1.06
GPC5P78333 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.69■■□□□ 1.06
GPC5P78333 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.69■■□□□ 1.06
GPC5P78333 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GPC5P78333 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
GPC5P78333 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.69■■□□□ 1.06
GPC5P78333 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GPC5P78333 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
GPC5P78333 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GPC5P78333 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
GPC5P78333 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GPC5P78333 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
GPC5P78333 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GPC5P78333 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.68■■□□□ 1.06
GPC5P78333 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.68■■□□□ 1.06
GPC5P78333 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GPC5P78333 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
GPC5P78333 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
GPC5P78333 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.68■■□□□ 1.06
GPC5P78333 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.68■■□□□ 1.06
GPC5P78333 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GPC5P78333 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GPC5P78333 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GPC5P78333 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
GPC5P78333 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.67■■□□□ 1.06
GPC5P78333 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC5P78333 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC5P78333 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC5P78333 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
GPC5P78333 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC5P78333 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC5P78333 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC5P78333 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GPC5P78333 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC5P78333 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.67■■□□□ 1.06
GPC5P78333 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
GPC5P78333 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GPC5P78333 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.67■■□□□ 1.06
GPC5P78333 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.67■■□□□ 1.06
GPC5P78333 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.67■■□□□ 1.06
GPC5P78333 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
GPC5P78333 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GPC5P78333 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.67■■□□□ 1.06
GPC5P78333 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC5P78333 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC5P78333 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GPC5P78333 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.67■■□□□ 1.06
GPC5P78333 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GPC5P78333 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC5P78333 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC5P78333 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
GPC5P78333 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.66■■□□□ 1.06
GPC5P78333 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
GPC5P78333 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC5P78333 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC5P78333 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC5P78333 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.66■■□□□ 1.06
GPC5P78333 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
GPC5P78333 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC5P78333 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.66■■□□□ 1.06
GPC5P78333 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.66■■□□□ 1.06
GPC5P78333 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GPC5P78333 AC091799.1-201ENST00000422823 811 ntBASIC21.66■■□□□ 1.06
GPC5P78333 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GPC5P78333 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.66■■□□□ 1.06
GPC5P78333 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GPC5P78333 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.66■■□□□ 1.06
GPC5P78333 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.66■■□□□ 1.06
GPC5P78333 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
GPC5P78333 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.66■■□□□ 1.06
GPC5P78333 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
GPC5P78333 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC5P78333 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.65■■□□□ 1.06
GPC5P78333 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPC5P78333 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
GPC5P78333 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPC5P78333 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.65■■□□□ 1.06
GPC5P78333 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPC5P78333 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPC5P78333 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.65■■□□□ 1.06
GPC5P78333 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPC5P78333 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
GPC5P78333 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPC5P78333 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.65■■□□□ 1.06
GPC5P78333 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.65■■□□□ 1.06
GPC5P78333 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPC5P78333 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPC5P78333 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPC5P78333 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
GPC5P78333 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.65■■□□□ 1.06
GPC5P78333 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
GPC5P78333 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms