Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
YBX1P67809 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
YBX1P67809 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
YBX1P67809 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
YBX1P67809 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
YBX1P67809 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
YBX1P67809 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.59■□□□□ 0.73
YBX1P67809 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
YBX1P67809 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
YBX1P67809 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
YBX1P67809 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.59■□□□□ 0.73
YBX1P67809 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
YBX1P67809 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.59■□□□□ 0.73
YBX1P67809 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
YBX1P67809 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
YBX1P67809 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
YBX1P67809 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.58■□□□□ 0.73
YBX1P67809 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.58■□□□□ 0.73
YBX1P67809 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
YBX1P67809 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
YBX1P67809 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.58■□□□□ 0.72
YBX1P67809 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
YBX1P67809 DUSP5P2-201ENST00000426873 1033 ntBASIC19.58■□□□□ 0.72
YBX1P67809 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.58■□□□□ 0.72
YBX1P67809 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YBX1P67809 AC092118.2-201ENST00000613495 667 ntBASIC19.58■□□□□ 0.72
YBX1P67809 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YBX1P67809 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
YBX1P67809 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.58■□□□□ 0.72
YBX1P67809 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
YBX1P67809 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YBX1P67809 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YBX1P67809 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.58■□□□□ 0.72
YBX1P67809 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.58■□□□□ 0.72
YBX1P67809 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YBX1P67809 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.58■□□□□ 0.72
YBX1P67809 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
YBX1P67809 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
YBX1P67809 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.57■□□□□ 0.72
YBX1P67809 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
YBX1P67809 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
YBX1P67809 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
YBX1P67809 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
YBX1P67809 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
YBX1P67809 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
YBX1P67809 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
YBX1P67809 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.57■□□□□ 0.72
YBX1P67809 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.57■□□□□ 0.72
YBX1P67809 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.57■□□□□ 0.72
YBX1P67809 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.57■□□□□ 0.72
YBX1P67809 AL589743.5-201ENST00000616611 1050 ntBASIC19.57■□□□□ 0.72
YBX1P67809 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
YBX1P67809 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
YBX1P67809 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
YBX1P67809 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
YBX1P67809 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.57■□□□□ 0.72
YBX1P67809 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.56■□□□□ 0.72
YBX1P67809 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
YBX1P67809 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
YBX1P67809 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
YBX1P67809 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
YBX1P67809 AC087289.5-201ENST00000586076 3175 ntBASIC19.56■□□□□ 0.72
YBX1P67809 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
YBX1P67809 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.56■□□□□ 0.72
YBX1P67809 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.56■□□□□ 0.72
YBX1P67809 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.56■□□□□ 0.72
YBX1P67809 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
YBX1P67809 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
YBX1P67809 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.56■□□□□ 0.72
YBX1P67809 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
YBX1P67809 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.56■□□□□ 0.72
YBX1P67809 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
YBX1P67809 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
YBX1P67809 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
YBX1P67809 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
YBX1P67809 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.55■□□□□ 0.72
YBX1P67809 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
YBX1P67809 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.55■□□□□ 0.72
YBX1P67809 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.55■□□□□ 0.72
YBX1P67809 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
YBX1P67809 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.55■□□□□ 0.72
YBX1P67809 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
YBX1P67809 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
YBX1P67809 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.55■□□□□ 0.72
YBX1P67809 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.55■□□□□ 0.72
YBX1P67809 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.55■□□□□ 0.72
YBX1P67809 AC069152.1-201ENST00000438030 544 ntBASIC19.55■□□□□ 0.72
YBX1P67809 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.55■□□□□ 0.72
YBX1P67809 AC091874.3-201ENST00000512672 1195 ntBASIC19.55■□□□□ 0.72
YBX1P67809 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.55■□□□□ 0.72
YBX1P67809 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.55■□□□□ 0.72
YBX1P67809 MIR4758-201ENST00000577688 71 ntBASIC19.55■□□□□ 0.72
YBX1P67809 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
YBX1P67809 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
YBX1P67809 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
YBX1P67809 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
YBX1P67809 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
YBX1P67809 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
YBX1P67809 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
YBX1P67809 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms