Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRP54P61011 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
SRP54P61011 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRP54P61011 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRP54P61011 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.82■□□□□ 0.76
SRP54P61011 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.82■□□□□ 0.76
SRP54P61011 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SRP54P61011 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SRP54P61011 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.82■□□□□ 0.76
SRP54P61011 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.82■□□□□ 0.76
SRP54P61011 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SRP54P61011 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.82■□□□□ 0.76
SRP54P61011 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
SRP54P61011 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SRP54P61011 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRP54P61011 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SRP54P61011 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.82■□□□□ 0.76
SRP54P61011 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SRP54P61011 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRP54P61011 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRP54P61011 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SRP54P61011 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.82■□□□□ 0.76
SRP54P61011 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.82■□□□□ 0.76
SRP54P61011 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SRP54P61011 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.81■□□□□ 0.76
SRP54P61011 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
SRP54P61011 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SRP54P61011 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRP54P61011 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRP54P61011 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRP54P61011 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SRP54P61011 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.81■□□□□ 0.76
SRP54P61011 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SRP54P61011 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.81■□□□□ 0.76
SRP54P61011 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.81■□□□□ 0.76
SRP54P61011 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRP54P61011 AL023875.1-201ENST00000640777 796 ntBASIC19.81■□□□□ 0.76
SRP54P61011 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRP54P61011 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRP54P61011 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.81■□□□□ 0.76
SRP54P61011 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.81■□□□□ 0.76
SRP54P61011 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRP54P61011 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SRP54P61011 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRP54P61011 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRP54P61011 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRP54P61011 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
SRP54P61011 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
SRP54P61011 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.8■□□□□ 0.76
SRP54P61011 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRP54P61011 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SRP54P61011 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRP54P61011 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRP54P61011 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SRP54P61011 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.8■□□□□ 0.76
SRP54P61011 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.8■□□□□ 0.76
SRP54P61011 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
SRP54P61011 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
SRP54P61011 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.8■□□□□ 0.76
SRP54P61011 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRP54P61011 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRP54P61011 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRP54P61011 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRP54P61011 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRP54P61011 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRP54P61011 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SRP54P61011 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRP54P61011 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRP54P61011 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.79■□□□□ 0.76
SRP54P61011 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRP54P61011 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRP54P61011 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SRP54P61011 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRP54P61011 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRP54P61011 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.79■□□□□ 0.76
SRP54P61011 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRP54P61011 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.79■□□□□ 0.76
SRP54P61011 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRP54P61011 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SRP54P61011 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRP54P61011 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRP54P61011 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.79■□□□□ 0.76
SRP54P61011 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRP54P61011 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SRP54P61011 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRP54P61011 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SRP54P61011 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.78■□□□□ 0.76
SRP54P61011 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.78■□□□□ 0.76
SRP54P61011 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRP54P61011 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SRP54P61011 MIR718-201ENST00000390190 70 ntBASIC19.78■□□□□ 0.76
SRP54P61011 AC239809.2-201ENST00000415381 517 ntBASIC19.78■□□□□ 0.76
SRP54P61011 AL596275.1-201ENST00000423464 877 ntBASIC19.78■□□□□ 0.76
SRP54P61011 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.78■□□□□ 0.76
SRP54P61011 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
SRP54P61011 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SRP54P61011 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SRP54P61011 AC124016.1-201ENST00000609552 612 ntBASIC19.78■□□□□ 0.76
SRP54P61011 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.78■□□□□ 0.76
SRP54P61011 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms