Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH12P55289 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH12P55289 DPP3P2-201ENST00000416030 1696 ntBASIC18.66■□□□□ 0.58
CDH12P55289 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH12P55289 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH12P55289 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH12P55289 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH12P55289 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH12P55289 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH12P55289 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH12P55289 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH12P55289 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH12P55289 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH12P55289 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH12P55289 UBE2DNL-204ENST00000602536 740 ntBASIC18.66■□□□□ 0.58
CDH12P55289 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.66■□□□□ 0.58
CDH12P55289 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDH12P55289 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH12P55289 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH12P55289 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH12P55289 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH12P55289 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH12P55289 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH12P55289 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDH12P55289 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH12P55289 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH12P55289 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH12P55289 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH12P55289 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH12P55289 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CDH12P55289 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH12P55289 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH12P55289 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH12P55289 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.65■□□□□ 0.58
CDH12P55289 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.65■□□□□ 0.58
CDH12P55289 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH12P55289 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH12P55289 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH12P55289 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDH12P55289 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH12P55289 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CDH12P55289 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDH12P55289 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CDH12P55289 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.64■□□□□ 0.58
CDH12P55289 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CDH12P55289 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CDH12P55289 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH12P55289 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH12P55289 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH12P55289 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH12P55289 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CDH12P55289 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH12P55289 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH12P55289 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDH12P55289 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH12P55289 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH12P55289 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CDH12P55289 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH12P55289 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH12P55289 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH12P55289 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH12P55289 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH12P55289 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH12P55289 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH12P55289 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH12P55289 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH12P55289 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH12P55289 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH12P55289 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
CDH12P55289 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH12P55289 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH12P55289 AC018445.3-201ENST00000624177 1945 ntBASIC18.63■□□□□ 0.57
CDH12P55289 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CDH12P55289 AL691432.2-201ENST00000607222 2038 ntBASIC18.63■□□□□ 0.57
CDH12P55289 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH12P55289 AC007322.3-201ENST00000426526 701 ntBASIC18.63■□□□□ 0.57
CDH12P55289 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH12P55289 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH12P55289 NTF6G-201ENST00000591094 616 ntBASIC18.63■□□□□ 0.57
CDH12P55289 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH12P55289 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH12P55289 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH12P55289 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CDH12P55289 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH12P55289 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDH12P55289 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH12P55289 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH12P55289 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH12P55289 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDH12P55289 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH12P55289 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH12P55289 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CDH12P55289 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH12P55289 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH12P55289 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CDH12P55289 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH12P55289 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH12P55289 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH12P55289 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH12P55289 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms