Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH6P55285 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.89■□□□□ 0.93
CDH6P55285 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
CDH6P55285 AC133552.2-202ENST00000575694 574 ntBASIC20.89■□□□□ 0.93
CDH6P55285 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.89■□□□□ 0.93
CDH6P55285 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH6P55285 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
CDH6P55285 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH6P55285 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CDH6P55285 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH6P55285 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH6P55285 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH6P55285 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH6P55285 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH6P55285 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.88■□□□□ 0.93
CDH6P55285 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH6P55285 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CDH6P55285 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CDH6P55285 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH6P55285 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH6P55285 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH6P55285 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDH6P55285 AL589743.5-201ENST00000616611 1050 ntBASIC20.88■□□□□ 0.93
CDH6P55285 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH6P55285 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CDH6P55285 BX119927.1-201ENST00000636596 1552 ntBASIC20.88■□□□□ 0.93
CDH6P55285 KRT17P1-201ENST00000399211 1546 ntBASIC20.88■□□□□ 0.93
CDH6P55285 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDH6P55285 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH6P55285 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH6P55285 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH6P55285 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH6P55285 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH6P55285 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH6P55285 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH6P55285 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH6P55285 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH6P55285 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH6P55285 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH6P55285 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH6P55285 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.87■□□□□ 0.93
CDH6P55285 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH6P55285 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH6P55285 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
CDH6P55285 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CDH6P55285 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH6P55285 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH6P55285 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH6P55285 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.86■□□□□ 0.93
CDH6P55285 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH6P55285 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH6P55285 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH6P55285 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH6P55285 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH6P55285 CROCCP5-201ENST00000436658 830 ntBASIC20.86■□□□□ 0.93
CDH6P55285 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH6P55285 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.86■□□□□ 0.93
CDH6P55285 AC105036.2-201ENST00000569468 176 ntBASIC20.86■□□□□ 0.93
CDH6P55285 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH6P55285 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CDH6P55285 PTBP1P-201ENST00000554374 1601 ntBASIC20.86■□□□□ 0.93
CDH6P55285 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CDH6P55285 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH6P55285 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH6P55285 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH6P55285 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.85■□□□□ 0.93
CDH6P55285 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH6P55285 AF201337.1-201ENST00000520239 748 ntBASIC20.85■□□□□ 0.93
CDH6P55285 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.85■□□□□ 0.93
CDH6P55285 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH6P55285 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH6P55285 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CDH6P55285 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH6P55285 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH6P55285 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH6P55285 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.85■□□□□ 0.93
CDH6P55285 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CDH6P55285 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH6P55285 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH6P55285 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH6P55285 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH6P55285 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH6P55285 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
CDH6P55285 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH6P55285 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH6P55285 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH6P55285 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH6P55285 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH6P55285 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH6P55285 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.84■□□□□ 0.93
CDH6P55285 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH6P55285 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH6P55285 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH6P55285 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH6P55285 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH6P55285 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.84■□□□□ 0.93
CDH6P55285 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH6P55285 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CDH6P55285 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CDH6P55285 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms