Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HMGA2P52926 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGA2P52926 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGA2P52926 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HMGA2P52926 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
HMGA2P52926 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.33■□□□□ 0.53
HMGA2P52926 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HMGA2P52926 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGA2P52926 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGA2P52926 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGA2P52926 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGA2P52926 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGA2P52926 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.33■□□□□ 0.53
HMGA2P52926 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGA2P52926 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.33■□□□□ 0.53
HMGA2P52926 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGA2P52926 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGA2P52926 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGA2P52926 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HMGA2P52926 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HMGA2P52926 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGA2P52926 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGA2P52926 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.33■□□□□ 0.52
HMGA2P52926 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGA2P52926 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HMGA2P52926 PTBP1P-201ENST00000554374 1601 ntBASIC18.33■□□□□ 0.52
HMGA2P52926 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGA2P52926 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGA2P52926 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HMGA2P52926 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGA2P52926 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGA2P52926 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.32■□□□□ 0.52
HMGA2P52926 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGA2P52926 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGA2P52926 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HMGA2P52926 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGA2P52926 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HMGA2P52926 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGA2P52926 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGA2P52926 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGA2P52926 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGA2P52926 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGA2P52926 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.32■□□□□ 0.52
HMGA2P52926 AC004854.2-201ENST00000608450 1441 ntBASIC18.32■□□□□ 0.52
HMGA2P52926 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGA2P52926 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGA2P52926 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGA2P52926 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGA2P52926 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGA2P52926 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.31■□□□□ 0.52
HMGA2P52926 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGA2P52926 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGA2P52926 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.31■□□□□ 0.52
HMGA2P52926 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGA2P52926 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGA2P52926 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGA2P52926 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.31■□□□□ 0.52
HMGA2P52926 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGA2P52926 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGA2P52926 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGA2P52926 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGA2P52926 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGA2P52926 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMGA2P52926 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMGA2P52926 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGA2P52926 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGA2P52926 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGA2P52926 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGA2P52926 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMGA2P52926 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGA2P52926 AC004408.2-201ENST00000623613 2777 ntBASIC18.3■□□□□ 0.52
HMGA2P52926 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGA2P52926 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGA2P52926 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGA2P52926 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HMGA2P52926 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
HMGA2P52926 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.3■□□□□ 0.52
HMGA2P52926 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.3■□□□□ 0.52
HMGA2P52926 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGA2P52926 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HMGA2P52926 AC005837.3-201ENST00000612163 286 ntBASIC18.3■□□□□ 0.52
HMGA2P52926 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.3■□□□□ 0.52
HMGA2P52926 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.3■□□□□ 0.52
HMGA2P52926 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HMGA2P52926 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGA2P52926 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGA2P52926 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGA2P52926 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGA2P52926 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGA2P52926 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMGA2P52926 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGA2P52926 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGA2P52926 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HMGA2P52926 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGA2P52926 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGA2P52926 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
HMGA2P52926 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
HMGA2P52926 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HMGA2P52926 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
HMGA2P52926 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms