Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 YNL097C-BYNL097C-B 123 nt1.97□□□□□ -2.09
RFX1P48743 YOR072W-BYOR072W-B 162 nt1.97□□□□□ -2.09
RFX1P48743 NOC3YLR002C 1992 nt1.97□□□□□ -2.09
RFX1P48743 DGR2YKL121W 2559 nt1.97□□□□□ -2.09
RFX1P48743 ULI1YFR026C 510 nt1.96□□□□□ -2.1
RFX1P48743 YGL217CYGL217C 342 nt1.96□□□□□ -2.1
RFX1P48743 YBR131C-AYBR131C-A 90 nt1.96□□□□□ -2.1
RFX1P48743 PIG1YLR273C 1947 nt1.95□□□□□ -2.1
RFX1P48743 CUL3YGR003W 2235 nt1.94□□□□□ -2.1
RFX1P48743 PTP2YOR208W 2253 nt1.94□□□□□ -2.1
RFX1P48743 HER1YOR227W 3741 nt1.94□□□□□ -2.1
RFX1P48743 YLL007CYLL007C 1998 nt1.94□□□□□ -2.1
RFX1P48743 RPL31AYDL075W 342 nt1.93□□□□□ -2.1
RFX1P48743 snR46snR46 197 nt1.93□□□□□ -2.1
RFX1P48743 FRK1YPL141C 2598 nt1.93□□□□□ -2.1
RFX1P48743 IRC20YLR247C 4671 nt1.93□□□□□ -2.1
RFX1P48743 ATP8Q0080 147 nt1.92□□□□□ -2.1
RFX1P48743 TDA9YML081W 3756 nt1.92□□□□□ -2.1
RFX1P48743 PEP1YBL017C 4740 nt1.91□□□□□ -2.1
RFX1P48743 COF1YLL050C 432 nt1.91□□□□□ -2.1
RFX1P48743 SEY1YOR165W 2331 nt1.9□□□□□ -2.1
RFX1P48743 YDL007C-AYDL007C-A 258 nt1.9□□□□□ -2.11
RFX1P48743 snR52snR52 92 nt1.9□□□□□ -2.11
RFX1P48743 SIR4YDR227W 4077 nt1.9□□□□□ -2.11
RFX1P48743 YLR035C-AYLR035C-A 3468 nt1.9□□□□□ -2.11
RFX1P48743 LRE1YCL051W 1752 nt1.9□□□□□ -2.11
RFX1P48743 YHR214C-BYHR214C-B 5382 nt1.89□□□□□ -2.11
RFX1P48743 MYO4YAL029C 4416 nt1.88□□□□□ -2.11
RFX1P48743 YMR272W-BYMR272W-B 108 nt1.88□□□□□ -2.11
RFX1P48743 YOR170WYOR170W 306 nt1.88□□□□□ -2.11
RFX1P48743 SEC63YOR254C 1992 nt1.88□□□□□ -2.11
RFX1P48743 PIP2YOR363C 2991 nt1.87□□□□□ -2.11
RFX1P48743 HIR3YJR140C 4947 nt1.87□□□□□ -2.11
RFX1P48743 PAU3YCR104W 375 nt1.87□□□□□ -2.11
RFX1P48743 NCA2YPR155C 1851 nt1.87□□□□□ -2.11
RFX1P48743 YNL144CYNL144C 2223 nt1.87□□□□□ -2.11
RFX1P48743 PDR8YLR266C 2106 nt1.87□□□□□ -2.11
RFX1P48743 ATG9YDL149W 2994 nt1.86□□□□□ -2.11
RFX1P48743 YLL019W-AYLL019W-A 93 nt1.86□□□□□ -2.11
RFX1P48743 YMR175W-AYMR175W-A 195 nt1.86□□□□□ -2.11
RFX1P48743 MSH6YDR097C 3729 nt1.86□□□□□ -2.11
RFX1P48743 AIM44YPL158C 2277 nt1.86□□□□□ -2.11
RFX1P48743 YHR210CYHR210C 1026 nt1.85□□□□□ -2.11
RFX1P48743 ALK1YGL021W 2283 nt1.84□□□□□ -2.11
RFX1P48743 PBY1YBR094W 2262 nt1.84□□□□□ -2.11
RFX1P48743 SFB2YNL049C 2631 nt1.84□□□□□ -2.11
RFX1P48743 BPH1YCR032W 6504 nt1.84□□□□□ -2.11
RFX1P48743 YDL196WYDL196W 330 nt1.84□□□□□ -2.11
RFX1P48743 YOR345CYOR345C 351 nt1.84□□□□□ -2.11
RFX1P48743 SLI15YBR156C 2097 nt1.84□□□□□ -2.12
RFX1P48743 PKH2YOL100W 3246 nt1.83□□□□□ -2.12
RFX1P48743 AHC1YOR023C 1701 nt1.83□□□□□ -2.12
RFX1P48743 YDR521WYDR521W 336 nt1.83□□□□□ -2.12
RFX1P48743 RPL33BYOR234C 324 nt1.83□□□□□ -2.12
RFX1P48743 RTP1YMR185W 2946 nt1.83□□□□□ -2.12
RFX1P48743 FIG4YNL325C 2640 nt1.83□□□□□ -2.12
RFX1P48743 SLD3YGL113W 2007 nt1.83□□□□□ -2.12
RFX1P48743 COG4YPR105C 2586 nt1.82□□□□□ -2.12
RFX1P48743 YEL073CYEL073C 324 nt1.82□□□□□ -2.12
RFX1P48743 YOR381W-AYOR381W-A 168 nt1.82□□□□□ -2.12
RFX1P48743 MGA2YIR033W 3342 nt1.82□□□□□ -2.12
RFX1P48743 UTP21YLR409C 2820 nt1.81□□□□□ -2.12
RFX1P48743 MYO2YOR326W 4725 nt1.81□□□□□ -2.12
RFX1P48743 SBE22YHR103W 2559 nt1.8□□□□□ -2.12
RFX1P48743 YNL170WYNL170W 396 nt1.8□□□□□ -2.12
RFX1P48743 IFH1YLR223C 3258 nt1.8□□□□□ -2.12
RFX1P48743 YOR161W-BYOR161W-B 261 nt1.79□□□□□ -2.12
RFX1P48743 TMA7YLR262C-A 195 nt1.78□□□□□ -2.12
RFX1P48743 YBR206WYBR206W 324 nt1.78□□□□□ -2.12
RFX1P48743 CFT1YDR301W 4074 nt1.77□□□□□ -2.13
RFX1P48743 YMR247W-AYMR247W-A 144 nt1.77□□□□□ -2.13
RFX1P48743 SPO24YPR036W-A 204 nt1.77□□□□□ -2.13
RFX1P48743 ADR1YDR216W 3972 nt1.76□□□□□ -2.13
RFX1P48743 HAL9YOL089C 3093 nt1.76□□□□□ -2.13
RFX1P48743 PMP1YCR024C-A 123 nt1.76□□□□□ -2.13
RFX1P48743 COY1YKL179C 2040 nt1.76□□□□□ -2.13
RFX1P48743 tT(UGU)HtT(UGU)H 72 nt1.75□□□□□ -2.13
RFX1P48743 TRM3YDL112W 4311 nt1.75□□□□□ -2.13
RFX1P48743 YJR039WYJR039W 3366 nt1.75□□□□□ -2.13
RFX1P48743 HSL1YKL101W 4557 nt1.74□□□□□ -2.13
RFX1P48743 NUT1YGL151W 3399 nt1.74□□□□□ -2.13
RFX1P48743 EMC5YIL027C 426 nt1.74□□□□□ -2.13
RFX1P48743 REV3YPL167C 4515 nt1.74□□□□□ -2.13
RFX1P48743 YDR354C-AYDR354C-A 144 nt1.73□□□□□ -2.13
RFX1P48743 SDH6YDR379C-A 240 nt1.73□□□□□ -2.13
RFX1P48743 LHS1YKL073W 2646 nt1.73□□□□□ -2.13
RFX1P48743 YGR109W-BYGR109W-B 4644 nt1.72□□□□□ -2.13
RFX1P48743 YGR164WYGR164W 336 nt1.72□□□□□ -2.13
RFX1P48743 SAC3YDR159W 3906 nt1.71□□□□□ -2.14
RFX1P48743 RAD50YNL250W 3939 nt1.71□□□□□ -2.14
RFX1P48743 YOR093CYOR093C 4947 nt1.71□□□□□ -2.14
RFX1P48743 ALY2YJL084C 3141 nt1.69□□□□□ -2.14
RFX1P48743 VPS15YBR097W 4365 nt1.68□□□□□ -2.14
RFX1P48743 YDL206WYDL206W 2289 nt1.68□□□□□ -2.14
RFX1P48743 YJL026C-AYJL026C-A 222 nt1.68□□□□□ -2.14
RFX1P48743 APL1YJR005W 2103 nt1.68□□□□□ -2.14
RFX1P48743 YBR221W-AYBR221W-A 105 nt1.68□□□□□ -2.14
RFX1P48743 KIP1YBL063W 3336 nt1.68□□□□□ -2.14
RFX1P48743 SKI3YPR189W 4299 nt1.68□□□□□ -2.14
RFX1P48743 MEC1YBR136W 7107 nt1.68□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 303.7 ms