Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6CP48668 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.43■□□□□ 0.7
KRT6CP48668 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6CP48668 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT6CP48668 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6CP48668 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
KRT6CP48668 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
KRT6CP48668 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6CP48668 AC100791.3-201ENST00000617619 330 ntBASIC19.43■□□□□ 0.7
KRT6CP48668 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
KRT6CP48668 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT6CP48668 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KRT6CP48668 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6CP48668 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6CP48668 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KRT6CP48668 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6CP48668 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.43■□□□□ 0.7
KRT6CP48668 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6CP48668 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT6CP48668 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6CP48668 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
KRT6CP48668 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT6CP48668 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT6CP48668 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT6CP48668 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT6CP48668 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
KRT6CP48668 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
KRT6CP48668 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT6CP48668 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT6CP48668 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT6CP48668 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT6CP48668 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
KRT6CP48668 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT6CP48668 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT6CP48668 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT6CP48668 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.42■□□□□ 0.7
KRT6CP48668 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT6CP48668 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
KRT6CP48668 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KRT6CP48668 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT6CP48668 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
KRT6CP48668 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT6CP48668 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT6CP48668 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT6CP48668 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT6CP48668 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT6CP48668 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT6CP48668 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT6CP48668 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT6CP48668 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT6CP48668 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT6CP48668 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT6CP48668 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT6CP48668 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT6CP48668 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT6CP48668 BX119927.1-201ENST00000636596 1552 ntBASIC19.41■□□□□ 0.7
KRT6CP48668 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
KRT6CP48668 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
KRT6CP48668 MCRIP2P1-201ENST00000394346 511 ntBASIC19.41■□□□□ 0.7
KRT6CP48668 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.41■□□□□ 0.7
KRT6CP48668 AC026271.2-201ENST00000428091 497 ntBASIC19.41■□□□□ 0.7
KRT6CP48668 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
KRT6CP48668 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
KRT6CP48668 RARRES2P4-201ENST00000514074 484 ntBASIC19.41■□□□□ 0.7
KRT6CP48668 RARRES2P6-201ENST00000567333 442 ntBASIC19.41■□□□□ 0.7
KRT6CP48668 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
KRT6CP48668 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT6CP48668 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
KRT6CP48668 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT6CP48668 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT6CP48668 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT6CP48668 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT6CP48668 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT6CP48668 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT6CP48668 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT6CP48668 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT6CP48668 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT6CP48668 DUX4L16-201ENST00000555130 1264 ntBASIC19.4■□□□□ 0.7
KRT6CP48668 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.4■□□□□ 0.7
KRT6CP48668 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.4■□□□□ 0.7
KRT6CP48668 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT6CP48668 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.4■□□□□ 0.7
KRT6CP48668 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT6CP48668 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT6CP48668 AC007952.6-201ENST00000573168 2673 ntBASIC19.4■□□□□ 0.7
KRT6CP48668 AC003957.1-201ENST00000625108 2673 ntBASIC19.4■□□□□ 0.7
KRT6CP48668 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT6CP48668 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
KRT6CP48668 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT6CP48668 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT6CP48668 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT6CP48668 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT6CP48668 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT6CP48668 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT6CP48668 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT6CP48668 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.39■□□□□ 0.7
KRT6CP48668 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.39■□□□□ 0.7
KRT6CP48668 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT6CP48668 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
KRT6CP48668 AC006015.1-201ENST00000429970 570 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms