Protein–RNA interactions for Protein: P46992

YJL171C, Cell wall protein YJL171C, yeastyeast

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YJL171CP46992 MDS3YGL197W 4464 nt3.32□□□□□ -1.88
YJL171CP46992 PIK1YNL267W 3201 nt3.32□□□□□ -1.88
YJL171CP46992 ILS1YBL076C 3219 nt3.31□□□□□ -1.88
YJL171CP46992 MYO3YKL129C 3819 nt3.31□□□□□ -1.88
YJL171CP46992 POL5YEL055C 3069 nt3.31□□□□□ -1.88
YJL171CP46992 RPA190YOR341W 4995 nt3.31□□□□□ -1.88
YJL171CP46992 SPA2YLL021W 4401 nt3.31□□□□□ -1.88
YJL171CP46992 INP52YNL106C 3552 nt3.31□□□□□ -1.88
YJL171CP46992 YKL100W-AYKL100W-A 90 nt3.3□□□□□ -1.88
YJL171CP46992 YLR299C-AYLR299C-A 93 nt3.3□□□□□ -1.88
YJL171CP46992 VBA4YDR119W 2307 nt3.3□□□□□ -1.88
YJL171CP46992 FIR1YER032W 2631 nt3.29□□□□□ -1.88
YJL171CP46992 RIC1YLR039C 3171 nt3.29□□□□□ -1.88
YJL171CP46992 PSY2YNL201C 2577 nt3.29□□□□□ -1.88
YJL171CP46992 SPO22YIL073C 2928 nt3.29□□□□□ -1.88
YJL171CP46992 SET1YHR119W 3243 nt3.28□□□□□ -1.88
YJL171CP46992 HEF3YNL014W 3135 nt3.28□□□□□ -1.88
YJL171CP46992 POM152YMR129W 4014 nt3.28□□□□□ -1.88
YJL171CP46992 SAS3YBL052C 2496 nt3.28□□□□□ -1.88
YJL171CP46992 YEL025CYEL025C 3567 nt3.27□□□□□ -1.89
YJL171CP46992 RPS22AYJL190C 393 nt3.27□□□□□ -1.89
YJL171CP46992 snR40snR40 97 nt3.27□□□□□ -1.89
YJL171CP46992 snR70snR70 164 nt3.26□□□□□ -1.89
YJL171CP46992 HRD3YLR207W 2502 nt3.26□□□□□ -1.89
YJL171CP46992 RGA1YOR127W 3024 nt3.25□□□□□ -1.89
YJL171CP46992 PRP22YER013W 3438 nt3.25□□□□□ -1.89
YJL171CP46992 PSK2YOL045W 3306 nt3.25□□□□□ -1.89
YJL171CP46992 YML054C-AYML054C-A 159 nt3.25□□□□□ -1.89
YJL171CP46992 YBR200W-AYBR200W-A 165 nt3.25□□□□□ -1.89
YJL171CP46992 CAF120YNL278W 3183 nt3.25□□□□□ -1.89
YJL171CP46992 VPS3YDR495C 3036 nt3.25□□□□□ -1.89
YJL171CP46992 YDR186CYDR186C 2634 nt3.24□□□□□ -1.89
YJL171CP46992 TRL1YJL087C 2484 nt3.24□□□□□ -1.89
YJL171CP46992 NUP159YIL115C 4383 nt3.23□□□□□ -1.89
YJL171CP46992 RTT10YPL183C 3042 nt3.22□□□□□ -1.89
YJL171CP46992 RAX2YLR084C 3663 nt3.22□□□□□ -1.89
YJL171CP46992 NNF2YGR089W 2811 nt3.22□□□□□ -1.89
YJL171CP46992 tW(CCA)G1tW(CCA)G1 72 nt3.22□□□□□ -1.89
YJL171CP46992 tW(CCA)G2tW(CCA)G2 72 nt3.22□□□□□ -1.89
YJL171CP46992 tW(CCA)JtW(CCA)J 72 nt3.22□□□□□ -1.89
YJL171CP46992 tW(CCA)KtW(CCA)K 72 nt3.22□□□□□ -1.89
YJL171CP46992 tW(CCA)MtW(CCA)M 72 nt3.22□□□□□ -1.89
YJL171CP46992 tW(CCA)PtW(CCA)P 72 nt3.22□□□□□ -1.89
YJL171CP46992 BMS1YPL217C 3552 nt3.22□□□□□ -1.89
YJL171CP46992 NET1YJL076W 3570 nt3.21□□□□□ -1.9
YJL171CP46992 VPS16YPL045W 2397 nt3.2□□□□□ -1.9
YJL171CP46992 IKI3YLR384C 4050 nt3.2□□□□□ -1.9
YJL171CP46992 CHS1YNL192W 3396 nt3.2□□□□□ -1.9
YJL171CP46992 YDR464C-AYDR464C-A 189 nt3.2□□□□□ -1.9
YJL171CP46992 YHR180C-BYHR180C-B 105 nt3.2□□□□□ -1.9
YJL171CP46992 ZRG8YER033C 3231 nt3.2□□□□□ -1.9
YJL171CP46992 PDR3YBL005W 2931 nt3.2□□□□□ -1.9
YJL171CP46992 EST2YLR318W 2655 nt3.19□□□□□ -1.9
YJL171CP46992 tD(GUC)QtD(GUC)Q 75 nt3.19□□□□□ -1.9
YJL171CP46992 NOP14YDL148C 2433 nt3.18□□□□□ -1.9
YJL171CP46992 TSC11YER093C 4293 nt3.17□□□□□ -1.9
YJL171CP46992 AGC1YPR021C 2709 nt3.17□□□□□ -1.9
YJL171CP46992 BUL2YML111W 2763 nt3.17□□□□□ -1.9
YJL171CP46992 RPO41YFL036W 4056 nt3.17□□□□□ -1.9
YJL171CP46992 RRP5YMR229C 5190 nt3.17□□□□□ -1.9
YJL171CP46992 PSK1YAL017W 4071 nt3.16□□□□□ -1.9
YJL171CP46992 TAF2YCR042C 4224 nt3.16□□□□□ -1.9
YJL171CP46992 YDR209CYDR209C 414 nt3.15□□□□□ -1.91
YJL171CP46992 DCP2YNL118C 2913 nt3.15□□□□□ -1.91
YJL171CP46992 CDC60YPL160W 3273 nt3.15□□□□□ -1.91
YJL171CP46992 PMR1YGL167C 2853 nt3.14□□□□□ -1.91
YJL171CP46992 YDR034C-DYDR034C-D 5313 nt3.14□□□□□ -1.91
YJL171CP46992 SIN3YOL004W 4611 nt3.14□□□□□ -1.91
YJL171CP46992 SEC21YNL287W 2808 nt3.14□□□□□ -1.91
YJL171CP46992 PKH3YDR466W 2697 nt3.13□□□□□ -1.91
YJL171CP46992 RPL26BYGR034W 384 nt3.13□□□□□ -1.91
YJL171CP46992 KAP123YER110C 3342 nt3.13□□□□□ -1.91
YJL171CP46992 MET6YER091C 2304 nt3.12□□□□□ -1.91
YJL171CP46992 PDR1YGL013C 3207 nt3.12□□□□□ -1.91
YJL171CP46992 ENA5YDR038C 3276 nt3.11□□□□□ -1.91
YJL171CP46992 GCN1YGL195W 8019 nt3.11□□□□□ -1.91
YJL171CP46992 KSP1YHR082C 3090 nt3.11□□□□□ -1.91
YJL171CP46992 GCV2YMR189W 3105 nt3.11□□□□□ -1.91
YJL171CP46992 XRN1YGL173C 4587 nt3.1□□□□□ -1.91
YJL171CP46992 MMS22YLR320W 4365 nt3.1□□□□□ -1.91
YJL171CP46992 YOR394C-AYOR394C-A 168 nt3.1□□□□□ -1.91
YJL171CP46992 YPL060C-AYPL060C-A 3315 nt3.1□□□□□ -1.91
YJL171CP46992 CSR2YPR030W 3366 nt3.1□□□□□ -1.91
YJL171CP46992 SCP160YJL080C 3669 nt3.09□□□□□ -1.91
YJL171CP46992 YPR097WYPR097W 3222 nt3.09□□□□□ -1.91
YJL171CP46992 YDL159C-BYDL159C-B 177 nt3.09□□□□□ -1.91
YJL171CP46992 MRD1YPR112C 2664 nt3.08□□□□□ -1.92
YJL171CP46992 VMR1YHL035C 4779 nt3.08□□□□□ -1.92
YJL171CP46992 ALY2YJL084C 3141 nt3.08□□□□□ -1.92
YJL171CP46992 TAE2YPL009C 3117 nt3.08□□□□□ -1.92
YJL171CP46992 PRP6YBR055C 2700 nt3.07□□□□□ -1.92
YJL171CP46992 RPS28BYLR264W 204 nt3.07□□□□□ -1.92
YJL171CP46992 TRS130YMR218C 3309 nt3.07□□□□□ -1.92
YJL171CP46992 YDR210W-BYDR210W-B 5313 nt3.06□□□□□ -1.92
YJL171CP46992 YDR261W-BYDR261W-B 5313 nt3.06□□□□□ -1.92
YJL171CP46992 YFL002W-AYFL002W-A 5313 nt3.06□□□□□ -1.92
YJL171CP46992 YGR161W-BYGR161W-B 5313 nt3.06□□□□□ -1.92
YJL171CP46992 YLR410W-BYLR410W-B 5313 nt3.06□□□□□ -1.92
YJL171CP46992 YCL019WYCL019W 5313 nt3.06□□□□□ -1.92
YJL171CP46992 ANS1YHR126C 480 nt3.06□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 1000.8 ms