Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.62■■□□□ 1.69
COL15A1P39059 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.62■■□□□ 1.69
COL15A1P39059 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC25.62■■□□□ 1.69
COL15A1P39059 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL15A1P39059 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL15A1P39059 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
COL15A1P39059 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL15A1P39059 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
COL15A1P39059 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL15A1P39059 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL15A1P39059 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL15A1P39059 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC25.61■■□□□ 1.69
COL15A1P39059 CBFB-203ENST00000561924 584 ntTSL 5 BASIC25.61■■□□□ 1.69
COL15A1P39059 MIR6786-201ENST00000616843 113 ntBASIC25.61■■□□□ 1.69
COL15A1P39059 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL15A1P39059 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.61■■□□□ 1.69
COL15A1P39059 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
COL15A1P39059 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL15A1P39059 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.61■■□□□ 1.69
COL15A1P39059 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
COL15A1P39059 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
COL15A1P39059 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
COL15A1P39059 RBM17P1-201ENST00000453646 1190 ntBASIC25.6■■□□□ 1.69
COL15A1P39059 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL15A1P39059 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL15A1P39059 NUDT16P1-203ENST00000513809 620 ntBASIC25.6■■□□□ 1.69
COL15A1P39059 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC25.6■■□□□ 1.69
COL15A1P39059 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC25.6■■□□□ 1.69
COL15A1P39059 AC073195.1-201ENST00000607241 877 ntBASIC25.6■■□□□ 1.69
COL15A1P39059 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL15A1P39059 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.6■■□□□ 1.69
COL15A1P39059 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
COL15A1P39059 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL15A1P39059 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.59■■□□□ 1.69
COL15A1P39059 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL15A1P39059 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC25.59■■□□□ 1.69
COL15A1P39059 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.59■■□□□ 1.69
COL15A1P39059 PNN-205ENST00000556530 601 ntTSL 2 BASIC25.59■■□□□ 1.69
COL15A1P39059 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
COL15A1P39059 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
COL15A1P39059 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
COL15A1P39059 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL15A1P39059 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.59■■□□□ 1.69
COL15A1P39059 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
COL15A1P39059 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
COL15A1P39059 KRT8P9-201ENST00000558927 1449 ntBASIC25.59■■□□□ 1.69
COL15A1P39059 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.59■■□□□ 1.69
COL15A1P39059 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC25.59■■□□□ 1.69
COL15A1P39059 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
COL15A1P39059 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
COL15A1P39059 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC25.58■■□□□ 1.69
COL15A1P39059 AC145285.6-201ENST00000604632 637 ntBASIC25.58■■□□□ 1.69
COL15A1P39059 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC25.58■■□□□ 1.69
COL15A1P39059 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC25.58■■□□□ 1.69
COL15A1P39059 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.58■■□□□ 1.69
COL15A1P39059 AC026310.3-201ENST00000625186 2373 ntBASIC25.58■■□□□ 1.69
COL15A1P39059 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC25.58■■□□□ 1.69
COL15A1P39059 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
COL15A1P39059 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL15A1P39059 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL15A1P39059 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.58■■□□□ 1.69
COL15A1P39059 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL15A1P39059 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL15A1P39059 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
COL15A1P39059 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
COL15A1P39059 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL15A1P39059 REXO1L10P-201ENST00000615707 1290 ntBASIC25.57■■□□□ 1.68
COL15A1P39059 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
COL15A1P39059 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL15A1P39059 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC25.57■■□□□ 1.68
COL15A1P39059 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL15A1P39059 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL15A1P39059 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
COL15A1P39059 AC079598.2-202ENST00000546624 1451 ntBASIC25.57■■□□□ 1.68
COL15A1P39059 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL15A1P39059 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL15A1P39059 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL15A1P39059 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
COL15A1P39059 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC25.56■■□□□ 1.68
COL15A1P39059 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC25.56■■□□□ 1.68
COL15A1P39059 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
COL15A1P39059 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC25.56■■□□□ 1.68
COL15A1P39059 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC25.56■■□□□ 1.68
COL15A1P39059 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC25.56■■□□□ 1.68
COL15A1P39059 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL15A1P39059 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL15A1P39059 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL15A1P39059 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL15A1P39059 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.56■■□□□ 1.68
COL15A1P39059 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL15A1P39059 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL15A1P39059 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.56■■□□□ 1.68
COL15A1P39059 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL15A1P39059 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC25.56■■□□□ 1.68
COL15A1P39059 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL15A1P39059 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC25.56■■□□□ 1.68
COL15A1P39059 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL15A1P39059 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL15A1P39059 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC25.55■■□□□ 1.68
COL15A1P39059 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms