Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 BX119927.1-201ENST00000636596 1552 ntBASIC20.02■□□□□ 0.8
HMGCLP35914 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.02■□□□□ 0.8
HMGCLP35914 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
HMGCLP35914 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCLP35914 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HMGCLP35914 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
HMGCLP35914 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HMGCLP35914 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HMGCLP35914 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
HMGCLP35914 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
HMGCLP35914 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HMGCLP35914 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HMGCLP35914 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCLP35914 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCLP35914 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.01■□□□□ 0.79
HMGCLP35914 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HMGCLP35914 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.01■□□□□ 0.79
HMGCLP35914 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCLP35914 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCLP35914 AC092368.3-202ENST00000574180 1591 ntBASIC20.01■□□□□ 0.79
HMGCLP35914 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCLP35914 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.01■□□□□ 0.79
HMGCLP35914 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCLP35914 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HMGCLP35914 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCLP35914 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.01■□□□□ 0.79
HMGCLP35914 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.01■□□□□ 0.79
HMGCLP35914 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCLP35914 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCLP35914 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCLP35914 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCLP35914 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCLP35914 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCLP35914 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCLP35914 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCLP35914 AL391422.3-201ENST00000603791 2761 ntBASIC20■□□□□ 0.79
HMGCLP35914 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCLP35914 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20■□□□□ 0.79
HMGCLP35914 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCLP35914 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCLP35914 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20■□□□□ 0.79
HMGCLP35914 AL390719.1-204ENST00000412397 1219 ntBASIC20■□□□□ 0.79
HMGCLP35914 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HMGCLP35914 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20■□□□□ 0.79
HMGCLP35914 PNMA6B-201ENST00000538162 1200 ntBASIC20■□□□□ 0.79
HMGCLP35914 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
HMGCLP35914 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20■□□□□ 0.79
HMGCLP35914 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20■□□□□ 0.79
HMGCLP35914 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20■□□□□ 0.79
HMGCLP35914 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HMGCLP35914 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20■□□□□ 0.79
HMGCLP35914 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCLP35914 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
HMGCLP35914 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20■□□□□ 0.79
HMGCLP35914 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCLP35914 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCLP35914 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCLP35914 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGCLP35914 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCLP35914 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGCLP35914 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.99■□□□□ 0.79
HMGCLP35914 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HMGCLP35914 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCLP35914 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCLP35914 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGCLP35914 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HMGCLP35914 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGCLP35914 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGCLP35914 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGCLP35914 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGCLP35914 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCLP35914 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGCLP35914 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCLP35914 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGCLP35914 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCLP35914 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCLP35914 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCLP35914 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
HMGCLP35914 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.98■□□□□ 0.79
HMGCLP35914 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.98■□□□□ 0.79
HMGCLP35914 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.98■□□□□ 0.79
HMGCLP35914 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.98■□□□□ 0.79
HMGCLP35914 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.98■□□□□ 0.79
HMGCLP35914 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGCLP35914 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGCLP35914 KRT18P6-201ENST00000555540 1265 ntBASIC19.98■□□□□ 0.79
HMGCLP35914 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 KRT16P6-202ENST00000425692 1426 ntBASIC19.98■□□□□ 0.79
HMGCLP35914 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms