Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN7P35236 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.77■□□□□ 0.92
PTPN7P35236 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PTPN7P35236 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN7P35236 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN7P35236 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.77■□□□□ 0.92
PTPN7P35236 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.77■□□□□ 0.92
PTPN7P35236 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.77■□□□□ 0.92
PTPN7P35236 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN7P35236 AC011767.1-201ENST00000617410 1153 ntBASIC20.77■□□□□ 0.92
PTPN7P35236 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.77■□□□□ 0.92
PTPN7P35236 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN7P35236 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN7P35236 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN7P35236 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.77■□□□□ 0.92
PTPN7P35236 KRT8P17-201ENST00000453110 1448 ntBASIC20.77■□□□□ 0.91
PTPN7P35236 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
PTPN7P35236 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PTPN7P35236 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPN7P35236 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN7P35236 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
PTPN7P35236 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN7P35236 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN7P35236 KRT18P68-201ENST00000392293 1000 ntBASIC20.76■□□□□ 0.91
PTPN7P35236 CYP2T1P-201ENST00000432607 1285 ntBASIC20.76■□□□□ 0.91
PTPN7P35236 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.76■□□□□ 0.91
PTPN7P35236 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN7P35236 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPN7P35236 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PTPN7P35236 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN7P35236 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PTPN7P35236 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN7P35236 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPN7P35236 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PTPN7P35236 AC009237.14-201ENST00000609975 1594 ntBASIC20.76■□□□□ 0.91
PTPN7P35236 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN7P35236 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
PTPN7P35236 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN7P35236 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN7P35236 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN7P35236 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN7P35236 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN7P35236 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.75■□□□□ 0.91
PTPN7P35236 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN7P35236 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN7P35236 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN7P35236 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN7P35236 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN7P35236 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN7P35236 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN7P35236 RARRES2P6-201ENST00000567333 442 ntBASIC20.75■□□□□ 0.91
PTPN7P35236 AL031963.3-201ENST00000606441 850 ntBASIC20.75■□□□□ 0.91
PTPN7P35236 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN7P35236 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN7P35236 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN7P35236 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN7P35236 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN7P35236 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN7P35236 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN7P35236 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.74■□□□□ 0.91
PTPN7P35236 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PTPN7P35236 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN7P35236 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN7P35236 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN7P35236 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN7P35236 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.74■□□□□ 0.91
PTPN7P35236 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.74■□□□□ 0.91
PTPN7P35236 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.74■□□□□ 0.91
PTPN7P35236 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.74■□□□□ 0.91
PTPN7P35236 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN7P35236 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
PTPN7P35236 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN7P35236 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.74■□□□□ 0.91
PTPN7P35236 CYP2T3P-201ENST00000601990 817 ntBASIC20.74■□□□□ 0.91
PTPN7P35236 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN7P35236 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.74■□□□□ 0.91
PTPN7P35236 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN7P35236 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN7P35236 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPN7P35236 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PTPN7P35236 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN7P35236 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN7P35236 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN7P35236 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PTPN7P35236 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN7P35236 TREX1-205ENST00000625293 1783 ntBASIC20.73■□□□□ 0.91
PTPN7P35236 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPN7P35236 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPN7P35236 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN7P35236 AC231657.2-201ENST00000624556 255 ntBASIC20.73■□□□□ 0.91
PTPN7P35236 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN7P35236 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PTPN7P35236 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPN7P35236 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN7P35236 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPN7P35236 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN7P35236 AL158211.5-201ENST00000623583 2518 ntBASIC20.72■□□□□ 0.91
PTPN7P35236 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PTPN7P35236 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN7P35236 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms