Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PTPN3P26045 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN3P26045 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PTPN3P26045 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PTPN3P26045 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN3P26045 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN3P26045 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN3P26045 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.49■□□□□ 0.87
PTPN3P26045 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PTPN3P26045 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.49■□□□□ 0.87
PTPN3P26045 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN3P26045 C2orf69P4-201ENST00000565394 541 ntBASIC20.49■□□□□ 0.87
PTPN3P26045 AL121832.2-201ENST00000610979 668 ntBASIC20.49■□□□□ 0.87
PTPN3P26045 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN3P26045 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN3P26045 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN3P26045 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPN3P26045 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN3P26045 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PTPN3P26045 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN3P26045 AFG3L1P-217ENST00000557444 2447 ntBASIC20.48■□□□□ 0.87
PTPN3P26045 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN3P26045 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.48■□□□□ 0.87
PTPN3P26045 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN3P26045 LSM12P1-201ENST00000411836 588 ntBASIC20.48■□□□□ 0.87
PTPN3P26045 AC083906.2-201ENST00000511578 360 ntBASIC20.48■□□□□ 0.87
PTPN3P26045 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN3P26045 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.48■□□□□ 0.87
PTPN3P26045 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN3P26045 AL691432.2-201ENST00000607222 2038 ntBASIC20.48■□□□□ 0.87
PTPN3P26045 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PTPN3P26045 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PTPN3P26045 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.47■□□□□ 0.87
PTPN3P26045 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PTPN3P26045 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN3P26045 BX276092.2-201ENST00000417668 665 ntBASIC20.47■□□□□ 0.87
PTPN3P26045 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.47■□□□□ 0.87
PTPN3P26045 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN3P26045 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN3P26045 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN3P26045 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.47■□□□□ 0.87
PTPN3P26045 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN3P26045 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.47■□□□□ 0.87
PTPN3P26045 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN3P26045 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN3P26045 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN3P26045 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN3P26045 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN3P26045 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN3P26045 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PTPN3P26045 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN3P26045 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN3P26045 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN3P26045 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN3P26045 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN3P26045 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN3P26045 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN3P26045 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.46■□□□□ 0.87
PTPN3P26045 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PTPN3P26045 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN3P26045 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN3P26045 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.46■□□□□ 0.87
PTPN3P26045 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN3P26045 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
PTPN3P26045 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN3P26045 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN3P26045 KRT8P17-201ENST00000453110 1448 ntBASIC20.45■□□□□ 0.86
PTPN3P26045 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.45■□□□□ 0.86
PTPN3P26045 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN3P26045 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN3P26045 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.45■□□□□ 0.86
PTPN3P26045 GUSBP6-202ENST00000438529 1198 ntBASIC20.45■□□□□ 0.86
PTPN3P26045 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.45■□□□□ 0.86
PTPN3P26045 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.45■□□□□ 0.86
PTPN3P26045 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN3P26045 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PTPN3P26045 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN3P26045 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.45■□□□□ 0.86
PTPN3P26045 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN3P26045 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN3P26045 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN3P26045 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PTPN3P26045 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN3P26045 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN3P26045 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN3P26045 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN3P26045 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN3P26045 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.44■□□□□ 0.86
PTPN3P26045 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN3P26045 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN3P26045 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN3P26045 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN3P26045 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN3P26045 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPN3P26045 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.44■□□□□ 0.86
PTPN3P26045 MIPEPP3-201ENST00000412105 444 ntBASIC20.44■□□□□ 0.86
PTPN3P26045 NCF1B-203ENST00000435988 1254 ntBASIC20.44■□□□□ 0.86
PTPN3P26045 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.44■□□□□ 0.86
PTPN3P26045 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPN3P26045 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms