Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.28■□□□□ 0.68
CAPN3P20807 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN3P20807 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CAPN3P20807 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN3P20807 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.28■□□□□ 0.68
CAPN3P20807 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.28■□□□□ 0.68
CAPN3P20807 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.28■□□□□ 0.68
CAPN3P20807 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.28■□□□□ 0.68
CAPN3P20807 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.28■□□□□ 0.68
CAPN3P20807 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CAPN3P20807 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CAPN3P20807 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.28■□□□□ 0.68
CAPN3P20807 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.28■□□□□ 0.68
CAPN3P20807 AL109923.1-201ENST00000618799 583 ntBASIC19.28■□□□□ 0.68
CAPN3P20807 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN3P20807 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN3P20807 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN3P20807 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CAPN3P20807 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CAPN3P20807 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN3P20807 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN3P20807 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.27■□□□□ 0.68
CAPN3P20807 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.27■□□□□ 0.68
CAPN3P20807 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN3P20807 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.27■□□□□ 0.68
CAPN3P20807 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN3P20807 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN3P20807 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN3P20807 AC091799.1-201ENST00000422823 811 ntBASIC19.27■□□□□ 0.68
CAPN3P20807 AC006970.2-201ENST00000450065 779 ntBASIC19.27■□□□□ 0.68
CAPN3P20807 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.27■□□□□ 0.68
CAPN3P20807 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.27■□□□□ 0.68
CAPN3P20807 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.27■□□□□ 0.68
CAPN3P20807 AC104187.1-201ENST00000607510 612 ntBASIC19.27■□□□□ 0.68
CAPN3P20807 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN3P20807 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.27■□□□□ 0.68
CAPN3P20807 AC066615.1-201ENST00000640911 628 ntBASIC19.27■□□□□ 0.68
CAPN3P20807 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN3P20807 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CAPN3P20807 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN3P20807 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN3P20807 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN3P20807 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CAPN3P20807 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN3P20807 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN3P20807 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN3P20807 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN3P20807 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CAPN3P20807 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.26■□□□□ 0.67
CAPN3P20807 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN3P20807 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN3P20807 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN3P20807 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN3P20807 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CAPN3P20807 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN3P20807 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN3P20807 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CAPN3P20807 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN3P20807 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CAPN3P20807 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.26■□□□□ 0.67
CAPN3P20807 AL355802.2-201ENST00000402069 882 ntBASIC19.26■□□□□ 0.67
CAPN3P20807 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN3P20807 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.26■□□□□ 0.67
CAPN3P20807 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.26■□□□□ 0.67
CAPN3P20807 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.26■□□□□ 0.67
CAPN3P20807 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CAPN3P20807 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.26■□□□□ 0.67
CAPN3P20807 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN3P20807 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.26■□□□□ 0.67
CAPN3P20807 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN3P20807 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN3P20807 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN3P20807 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN3P20807 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
CAPN3P20807 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.26■□□□□ 0.67
CAPN3P20807 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CAPN3P20807 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.25■□□□□ 0.67
CAPN3P20807 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CAPN3P20807 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CAPN3P20807 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CAPN3P20807 AP000974.1-201ENST00000623909 2387 ntBASIC19.25■□□□□ 0.67
CAPN3P20807 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CAPN3P20807 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.25■□□□□ 0.67
CAPN3P20807 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN3P20807 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.25■□□□□ 0.67
CAPN3P20807 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.25■□□□□ 0.67
CAPN3P20807 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.25■□□□□ 0.67
CAPN3P20807 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.25■□□□□ 0.67
CAPN3P20807 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.25■□□□□ 0.67
CAPN3P20807 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.25■□□□□ 0.67
CAPN3P20807 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.25■□□□□ 0.67
CAPN3P20807 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.25■□□□□ 0.67
CAPN3P20807 AP001160.3-201ENST00000601484 763 ntBASIC19.25■□□□□ 0.67
CAPN3P20807 BID-214ENST00000617586 542 ntTSL 5 BASIC19.25■□□□□ 0.67
CAPN3P20807 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN3P20807 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.25■□□□□ 0.67
CAPN3P20807 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN3P20807 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN3P20807 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.25■□□□□ 0.67
CAPN3P20807 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms