Protein–RNA interactions for Protein: P20436

RPB8, DNA-directed RNA polymerases I, II, and III subunit RPABC3, yeastyeast

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB8P20436 BPH1YCR032W 6504 nt1.56□□□□□ -2.16
RPB8P20436 snR55snR55 98 nt1.55□□□□□ -2.16
RPB8P20436 GPG1YGL121C 381 nt1.55□□□□□ -2.16
RPB8P20436 YIR044CYIR044C 186 nt1.55□□□□□ -2.16
RPB8P20436 SPO24YPR036W-A 204 nt1.54□□□□□ -2.16
RPB8P20436 YCS4YLR272C 3531 nt1.54□□□□□ -2.16
RPB8P20436 EMC5YIL027C 426 nt1.53□□□□□ -2.16
RPB8P20436 YOR218CYOR218C 420 nt1.53□□□□□ -2.16
RPB8P20436 YOR302WYOR302W 78 nt1.53□□□□□ -2.16
RPB8P20436 YPR092WYPR092W 306 nt1.53□□□□□ -2.16
RPB8P20436 YBR174CYBR174C 315 nt1.53□□□□□ -2.16
RPB8P20436 LRE1YCL051W 1752 nt1.52□□□□□ -2.17
RPB8P20436 LHS1YKL073W 2646 nt1.52□□□□□ -2.17
RPB8P20436 COG4YPR105C 2586 nt1.52□□□□□ -2.17
RPB8P20436 snR74snR74 88 nt1.52□□□□□ -2.17
RPB8P20436 YDR521WYDR521W 336 nt1.52□□□□□ -2.17
RPB8P20436 tM(CAU)Q1tM(CAU)Q1 76 nt1.52□□□□□ -2.17
RPB8P20436 TRM732YMR259C 4263 nt1.52□□□□□ -2.17
RPB8P20436 MDS3YGL197W 4464 nt1.51□□□□□ -2.17
RPB8P20436 KAP122YGL016W 3246 nt1.51□□□□□ -2.17
RPB8P20436 APQ12YIL040W 417 nt1.51□□□□□ -2.17
RPB8P20436 PFD1YJL179W 330 nt1.51□□□□□ -2.17
RPB8P20436 BLI1YKL061W 342 nt1.51□□□□□ -2.17
RPB8P20436 VPS15YBR097W 4365 nt1.51□□□□□ -2.17
RPB8P20436 SLI15YBR156C 2097 nt1.51□□□□□ -2.17
RPB8P20436 ALK1YGL021W 2283 nt1.5□□□□□ -2.17
RPB8P20436 YMR230W-AYMR230W-A 189 nt1.5□□□□□ -2.17
RPB8P20436 SGF11YPL047W 300 nt1.5□□□□□ -2.17
RPB8P20436 IFH1YLR223C 3258 nt1.5□□□□□ -2.17
RPB8P20436 CTF4YPR135W 2784 nt1.5□□□□□ -2.17
RPB8P20436 CUL3YGR003W 2235 nt1.5□□□□□ -2.17
RPB8P20436 CFT1YDR301W 4074 nt1.5□□□□□ -2.17
RPB8P20436 SPC110YDR356W 2835 nt1.49□□□□□ -2.17
RPB8P20436 YLL007CYLL007C 1998 nt1.49□□□□□ -2.17
RPB8P20436 YMR046W-AYMR046W-A 129 nt1.49□□□□□ -2.17
RPB8P20436 YBR206WYBR206W 324 nt1.49□□□□□ -2.17
RPB8P20436 ALY2YJL084C 3141 nt1.49□□□□□ -2.17
RPB8P20436 POL5YEL055C 3069 nt1.49□□□□□ -2.17
RPB8P20436 TRM3YDL112W 4311 nt1.48□□□□□ -2.17
RPB8P20436 YGL217CYGL217C 342 nt1.48□□□□□ -2.17
RPB8P20436 YJL022WYJL022W 309 nt1.48□□□□□ -2.17
RPB8P20436 RRT15YLR162W-A 189 nt1.48□□□□□ -2.17
RPB8P20436 YMR247W-AYMR247W-A 144 nt1.48□□□□□ -2.17
RPB8P20436 PTP2YOR208W 2253 nt1.47□□□□□ -2.17
RPB8P20436 UFD2YDL190C 2886 nt1.47□□□□□ -2.17
RPB8P20436 PAU3YCR104W 375 nt1.47□□□□□ -2.17
RPB8P20436 COF1YLL050C 432 nt1.47□□□□□ -2.17
RPB8P20436 COA6YMR244C-A 315 nt1.47□□□□□ -2.17
RPB8P20436 RAD50YNL250W 3939 nt1.46□□□□□ -2.18
RPB8P20436 YIR030W-AYIR030W-A 384 nt1.46□□□□□ -2.18
RPB8P20436 VPS55YJR044C 423 nt1.46□□□□□ -2.18
RPB8P20436 YOR019WYOR019W 2193 nt1.45□□□□□ -2.18
RPB8P20436 SEC5YDR166C 2916 nt1.45□□□□□ -2.18
RPB8P20436 PAM16YJL104W 450 nt1.45□□□□□ -2.18
RPB8P20436 MCM10YIL150C 1716 nt1.45□□□□□ -2.18
RPB8P20436 PKH2YOL100W 3246 nt1.45□□□□□ -2.18
RPB8P20436 MEC1YBR136W 7107 nt1.44□□□□□ -2.18
RPB8P20436 snR14snR14 160 nt1.44□□□□□ -2.18
RPB8P20436 YBR182C-AYBR182C-A 195 nt1.44□□□□□ -2.18
RPB8P20436 SLX4YLR135W 2247 nt1.44□□□□□ -2.18
RPB8P20436 SMC4YLR086W 4257 nt1.44□□□□□ -2.18
RPB8P20436 YDR406W-AYDR406W-A 246 nt1.43□□□□□ -2.18
RPB8P20436 YOR376WYOR376W 369 nt1.42□□□□□ -2.18
RPB8P20436 YKU70YMR284W 1809 nt1.42□□□□□ -2.18
RPB8P20436 AHC1YOR023C 1701 nt1.41□□□□□ -2.18
RPB8P20436 YNL097C-BYNL097C-B 123 nt1.41□□□□□ -2.18
RPB8P20436 PMD1YER132C 5262 nt1.41□□□□□ -2.18
RPB8P20436 PBY1YBR094W 2262 nt1.41□□□□□ -2.18
RPB8P20436 SLD3YGL113W 2007 nt1.4□□□□□ -2.18
RPB8P20436 KIP1YBL063W 3336 nt1.4□□□□□ -2.18
RPB8P20436 YDL206WYDL206W 2289 nt1.4□□□□□ -2.19
RPB8P20436 NCA2YPR155C 1851 nt1.4□□□□□ -2.19
RPB8P20436 YCR018C-AYCR018C-A 255 nt1.4□□□□□ -2.19
RPB8P20436 ECM12YHR021W-A 456 nt1.4□□□□□ -2.19
RPB8P20436 PAN2YGL094C 3348 nt1.4□□□□□ -2.19
RPB8P20436 YLL019W-AYLL019W-A 93 nt1.39□□□□□ -2.19
RPB8P20436 YLR140WYLR140W 327 nt1.38□□□□□ -2.19
RPB8P20436 YNL337WYNL337W 255 nt1.38□□□□□ -2.19
RPB8P20436 YOR072W-BYOR072W-B 162 nt1.38□□□□□ -2.19
RPB8P20436 YLR422WYLR422W 5799 nt1.37□□□□□ -2.19
RPB8P20436 PIP2YOR363C 2991 nt1.37□□□□□ -2.19
RPB8P20436 HKR1YDR420W 5409 nt1.36□□□□□ -2.19
RPB8P20436 BST1YFL025C 3090 nt1.36□□□□□ -2.19
RPB8P20436 MMS4YBR098W 2076 nt1.35□□□□□ -2.19
RPB8P20436 YDL185C-AYDL185C-A 228 nt1.35□□□□□ -2.19
RPB8P20436 YDL196WYDL196W 330 nt1.35□□□□□ -2.19
RPB8P20436 YDR354C-AYDR354C-A 144 nt1.35□□□□□ -2.19
RPB8P20436 ISD11YER048W-A 285 nt1.35□□□□□ -2.19
RPB8P20436 OLI1Q0130 231 nt1.35□□□□□ -2.19
RPB8P20436 YAR009CYAR009C 3591 nt1.34□□□□□ -2.19
RPB8P20436 YJL026C-AYJL026C-A 222 nt1.34□□□□□ -2.19
RPB8P20436 YOR161W-BYOR161W-B 261 nt1.34□□□□□ -2.19
RPB8P20436 YOR225WYOR225W 330 nt1.34□□□□□ -2.19
RPB8P20436 SET3YKR029C 2256 nt1.34□□□□□ -2.2
RPB8P20436 SWI4YER111C 3282 nt1.34□□□□□ -2.2
RPB8P20436 CHS1YNL192W 3396 nt1.33□□□□□ -2.2
RPB8P20436 APL3YBL037W 3078 nt1.33□□□□□ -2.2
RPB8P20436 YBR131C-AYBR131C-A 90 nt1.33□□□□□ -2.2
RPB8P20436 YLL054CYLL054C 2532 nt1.33□□□□□ -2.2
RPB8P20436 IRA1YBR140C 9279 nt1.33□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 25.2 ms