Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 SLC7A5P1-201ENST00000568957 537 ntBASIC18.63■□□□□ 0.57
TNFRSF1BP20333 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 AC098818.2-201ENST00000564925 2320 ntBASIC18.63■□□□□ 0.57
TNFRSF1BP20333 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 ZNRF2P3-201ENST00000424200 374 ntBASIC18.62■□□□□ 0.57
TNFRSF1BP20333 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.62■□□□□ 0.57
TNFRSF1BP20333 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 AL020996.1-203ENST00000536896 2307 ntBASIC18.61■□□□□ 0.57
TNFRSF1BP20333 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
TNFRSF1BP20333 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF1BP20333 TMEM179-206ENST00000616017 1645 ntBASIC18.6■□□□□ 0.57
TNFRSF1BP20333 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF1BP20333 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF1BP20333 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.6■□□□□ 0.57
TNFRSF1BP20333 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
TNFRSF1BP20333 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.6■□□□□ 0.57
TNFRSF1BP20333 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF1BP20333 CDV3P1-201ENST00000471403 739 ntBASIC18.6■□□□□ 0.57
TNFRSF1BP20333 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.6■□□□□ 0.57
TNFRSF1BP20333 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF1BP20333 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TNFRSF1BP20333 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF1BP20333 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF1BP20333 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.6■□□□□ 0.57
TNFRSF1BP20333 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF1BP20333 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF1BP20333 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF1BP20333 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF1BP20333 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TNFRSF1BP20333 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.58■□□□□ 0.57
TNFRSF1BP20333 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.58■□□□□ 0.57
TNFRSF1BP20333 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms