Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NFKB1P19838 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NFKB1P19838 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
NFKB1P19838 BX276092.2-201ENST00000417668 665 ntBASIC20.44■□□□□ 0.86
NFKB1P19838 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.44■□□□□ 0.86
NFKB1P19838 AC083906.2-201ENST00000511578 360 ntBASIC20.44■□□□□ 0.86
NFKB1P19838 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NFKB1P19838 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.44■□□□□ 0.86
NFKB1P19838 AL121832.2-201ENST00000610979 668 ntBASIC20.44■□□□□ 0.86
NFKB1P19838 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
NFKB1P19838 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.44■□□□□ 0.86
NFKB1P19838 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NFKB1P19838 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NFKB1P19838 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NFKB1P19838 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NFKB1P19838 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.44■□□□□ 0.86
NFKB1P19838 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NFKB1P19838 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NFKB1P19838 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NFKB1P19838 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.43■□□□□ 0.86
NFKB1P19838 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NFKB1P19838 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NFKB1P19838 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NFKB1P19838 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.43■□□□□ 0.86
NFKB1P19838 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NFKB1P19838 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.43■□□□□ 0.86
NFKB1P19838 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.43■□□□□ 0.86
NFKB1P19838 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NFKB1P19838 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NFKB1P19838 AFG3L1P-217ENST00000557444 2447 ntBASIC20.43■□□□□ 0.86
NFKB1P19838 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.43■□□□□ 0.86
NFKB1P19838 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
NFKB1P19838 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
NFKB1P19838 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.42■□□□□ 0.86
NFKB1P19838 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.42■□□□□ 0.86
NFKB1P19838 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.42■□□□□ 0.86
NFKB1P19838 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NFKB1P19838 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.42■□□□□ 0.86
NFKB1P19838 C2orf69P4-201ENST00000565394 541 ntBASIC20.42■□□□□ 0.86
NFKB1P19838 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.42■□□□□ 0.86
NFKB1P19838 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.42■□□□□ 0.86
NFKB1P19838 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NFKB1P19838 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NFKB1P19838 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NFKB1P19838 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NFKB1P19838 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NFKB1P19838 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NFKB1P19838 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NFKB1P19838 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NFKB1P19838 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFKB1P19838 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.41■□□□□ 0.86
NFKB1P19838 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.41■□□□□ 0.86
NFKB1P19838 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.41■□□□□ 0.86
NFKB1P19838 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.41■□□□□ 0.86
NFKB1P19838 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.41■□□□□ 0.86
NFKB1P19838 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.41■□□□□ 0.86
NFKB1P19838 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.41■□□□□ 0.86
NFKB1P19838 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFKB1P19838 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NFKB1P19838 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.41■□□□□ 0.86
NFKB1P19838 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NFKB1P19838 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.41■□□□□ 0.86
NFKB1P19838 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFKB1P19838 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFKB1P19838 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NFKB1P19838 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFKB1P19838 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NFKB1P19838 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NFKB1P19838 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.4■□□□□ 0.86
NFKB1P19838 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NFKB1P19838 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NFKB1P19838 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NFKB1P19838 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NFKB1P19838 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.4■□□□□ 0.86
NFKB1P19838 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NFKB1P19838 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NFKB1P19838 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NFKB1P19838 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.4■□□□□ 0.86
NFKB1P19838 AL691432.2-201ENST00000607222 2038 ntBASIC20.4■□□□□ 0.86
NFKB1P19838 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.4■□□□□ 0.86
NFKB1P19838 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
NFKB1P19838 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
NFKB1P19838 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NFKB1P19838 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NFKB1P19838 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NFKB1P19838 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NFKB1P19838 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.39■□□□□ 0.85
NFKB1P19838 MIPEPP3-201ENST00000412105 444 ntBASIC20.39■□□□□ 0.85
NFKB1P19838 NCF1B-203ENST00000435988 1254 ntBASIC20.39■□□□□ 0.85
NFKB1P19838 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.39■□□□□ 0.85
NFKB1P19838 GUSBP6-202ENST00000438529 1198 ntBASIC20.39■□□□□ 0.85
NFKB1P19838 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.39■□□□□ 0.85
NFKB1P19838 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.39■□□□□ 0.85
NFKB1P19838 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NFKB1P19838 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NFKB1P19838 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.39■□□□□ 0.85
NFKB1P19838 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NFKB1P19838 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NFKB1P19838 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.38■□□□□ 0.85
NFKB1P19838 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms