Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.04■□□□□ 0.64
CCL4P13236 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCL4P13236 HLA-G-202ENST00000376815 851 ntBASIC19.04■□□□□ 0.64
CCL4P13236 HLA-G-203ENST00000376818 1127 ntBASIC19.04■□□□□ 0.64
CCL4P13236 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCL4P13236 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL4P13236 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCL4P13236 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCL4P13236 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.04■□□□□ 0.64
CCL4P13236 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL4P13236 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.04■□□□□ 0.64
CCL4P13236 AC073195.1-201ENST00000607241 877 ntBASIC19.04■□□□□ 0.64
CCL4P13236 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.04■□□□□ 0.64
CCL4P13236 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL4P13236 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCL4P13236 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL4P13236 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.03■□□□□ 0.64
CCL4P13236 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL4P13236 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCL4P13236 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL4P13236 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL4P13236 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL4P13236 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL4P13236 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL4P13236 RCN1P1-201ENST00000400413 996 ntBASIC19.03■□□□□ 0.64
CCL4P13236 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.03■□□□□ 0.64
CCL4P13236 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.03■□□□□ 0.64
CCL4P13236 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.03■□□□□ 0.64
CCL4P13236 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCL4P13236 AC004264.1-201ENST00000608354 794 ntBASIC19.03■□□□□ 0.64
CCL4P13236 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.03■□□□□ 0.64
CCL4P13236 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL4P13236 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL4P13236 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.03■□□□□ 0.64
CCL4P13236 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL4P13236 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCL4P13236 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCL4P13236 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL4P13236 PLK5-205ENST00000642079 1969 ntBASIC19.02■□□□□ 0.64
CCL4P13236 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL4P13236 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL4P13236 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL4P13236 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL4P13236 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL4P13236 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCL4P13236 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCL4P13236 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCL4P13236 MMP23A-201ENST00000234610 1017 ntBASIC19.02■□□□□ 0.64
CCL4P13236 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL4P13236 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.02■□□□□ 0.64
CCL4P13236 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
CCL4P13236 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.02■□□□□ 0.64
CCL4P13236 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.02■□□□□ 0.64
CCL4P13236 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.02■□□□□ 0.64
CCL4P13236 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.02■□□□□ 0.64
CCL4P13236 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.02■□□□□ 0.64
CCL4P13236 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL4P13236 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCL4P13236 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.02■□□□□ 0.64
CCL4P13236 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.02■□□□□ 0.63
CCL4P13236 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCL4P13236 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CCL4P13236 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
CCL4P13236 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCL4P13236 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCL4P13236 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCL4P13236 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCL4P13236 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCL4P13236 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCL4P13236 FEM1AP4-201ENST00000443167 1987 ntBASIC19.01■□□□□ 0.63
CCL4P13236 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCL4P13236 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCL4P13236 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCL4P13236 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCL4P13236 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.01■□□□□ 0.63
CCL4P13236 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.01■□□□□ 0.63
CCL4P13236 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.01■□□□□ 0.63
CCL4P13236 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.01■□□□□ 0.63
CCL4P13236 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.01■□□□□ 0.63
CCL4P13236 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCL4P13236 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.01■□□□□ 0.63
CCL4P13236 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCL4P13236 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCL4P13236 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCL4P13236 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19■□□□□ 0.63
CCL4P13236 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
CCL4P13236 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19■□□□□ 0.63
CCL4P13236 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CCL4P13236 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
CCL4P13236 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCL4P13236 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCL4P13236 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCL4P13236 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCL4P13236 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCL4P13236 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCL4P13236 AP002982.1-201ENST00000492365 877 ntBASIC19■□□□□ 0.63
CCL4P13236 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19■□□□□ 0.63
CCL4P13236 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19■□□□□ 0.63
CCL4P13236 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19■□□□□ 0.63
CCL4P13236 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms