Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CHRNB1P11230 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNB1P11230 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.42■□□□□ 0.86
CHRNB1P11230 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.42■□□□□ 0.86
CHRNB1P11230 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.42■□□□□ 0.86
CHRNB1P11230 AC004264.1-201ENST00000608354 794 ntBASIC20.42■□□□□ 0.86
CHRNB1P11230 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.42■□□□□ 0.86
CHRNB1P11230 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNB1P11230 AL117328.2-201ENST00000624617 1940 ntBASIC20.42■□□□□ 0.86
CHRNB1P11230 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.42■□□□□ 0.86
CHRNB1P11230 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNB1P11230 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CHRNB1P11230 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNB1P11230 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNB1P11230 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNB1P11230 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.41■□□□□ 0.86
CHRNB1P11230 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNB1P11230 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNB1P11230 AP002982.1-201ENST00000492365 877 ntBASIC20.41■□□□□ 0.86
CHRNB1P11230 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.41■□□□□ 0.86
CHRNB1P11230 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.41■□□□□ 0.86
CHRNB1P11230 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
CHRNB1P11230 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNB1P11230 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNB1P11230 KRT8P36-201ENST00000489121 1440 ntBASIC20.41■□□□□ 0.86
CHRNB1P11230 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.41■□□□□ 0.86
CHRNB1P11230 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CHRNB1P11230 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNB1P11230 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNB1P11230 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CHRNB1P11230 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNB1P11230 MIR1238-201ENST00000408483 83 ntBASIC20.4■□□□□ 0.86
CHRNB1P11230 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.4■□□□□ 0.86
CHRNB1P11230 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.4■□□□□ 0.86
CHRNB1P11230 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.4■□□□□ 0.86
CHRNB1P11230 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.4■□□□□ 0.86
CHRNB1P11230 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
CHRNB1P11230 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.4■□□□□ 0.86
CHRNB1P11230 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.4■□□□□ 0.86
CHRNB1P11230 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.4■□□□□ 0.86
CHRNB1P11230 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNB1P11230 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.4■□□□□ 0.86
CHRNB1P11230 AL031963.3-201ENST00000606441 850 ntBASIC20.4■□□□□ 0.86
CHRNB1P11230 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.4■□□□□ 0.86
CHRNB1P11230 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.4■□□□□ 0.86
CHRNB1P11230 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHRNB1P11230 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.39■□□□□ 0.86
CHRNB1P11230 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHRNB1P11230 AC027702.1-201ENST00000563810 1770 ntBASIC20.39■□□□□ 0.86
CHRNB1P11230 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHRNB1P11230 LINC01568-207ENST00000641790 1380 ntBASIC20.39■□□□□ 0.85
CHRNB1P11230 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNB1P11230 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNB1P11230 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNB1P11230 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.39■□□□□ 0.85
CHRNB1P11230 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.39■□□□□ 0.85
CHRNB1P11230 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNB1P11230 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.39■□□□□ 0.85
CHRNB1P11230 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNB1P11230 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.39■□□□□ 0.85
CHRNB1P11230 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNB1P11230 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.39■□□□□ 0.85
CHRNB1P11230 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CHRNB1P11230 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.38■□□□□ 0.85
CHRNB1P11230 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB1P11230 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB1P11230 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB1P11230 AC113347.1-201ENST00000413321 391 ntBASIC20.38■□□□□ 0.85
CHRNB1P11230 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRNB1P11230 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB1P11230 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB1P11230 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRNB1P11230 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRNB1P11230 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CHRNB1P11230 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB1P11230 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CHRNB1P11230 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.37■□□□□ 0.85
CHRNB1P11230 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.37■□□□□ 0.85
CHRNB1P11230 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB1P11230 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB1P11230 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB1P11230 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB1P11230 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.37■□□□□ 0.85
CHRNB1P11230 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB1P11230 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB1P11230 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB1P11230 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB1P11230 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.37■□□□□ 0.85
CHRNB1P11230 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.37■□□□□ 0.85
CHRNB1P11230 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.37■□□□□ 0.85
CHRNB1P11230 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.37■□□□□ 0.85
CHRNB1P11230 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.37■□□□□ 0.85
CHRNB1P11230 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHRNB1P11230 MIR2861-201ENST00000636310 90 ntBASIC20.37■□□□□ 0.85
CHRNB1P11230 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB1P11230 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB1P11230 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB1P11230 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB1P11230 CYP2D8P-201ENST00000433633 1490 ntBASIC20.37■□□□□ 0.85
CHRNB1P11230 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms