Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC1P07992 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC1P07992 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC1P07992 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC1P07992 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC1P07992 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC1P07992 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC1P07992 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.74■□□□□ 0.43
ERCC1P07992 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.74■□□□□ 0.43
ERCC1P07992 AL138781.1-201ENST00000566567 1274 ntBASIC17.74■□□□□ 0.43
ERCC1P07992 AC142086.2-201ENST00000569753 217 ntBASIC17.74■□□□□ 0.43
ERCC1P07992 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.74■□□□□ 0.43
ERCC1P07992 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC1P07992 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC1P07992 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC1P07992 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ERCC1P07992 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ERCC1P07992 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.74■□□□□ 0.43
ERCC1P07992 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC1P07992 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC1P07992 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC1P07992 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC1P07992 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ERCC1P07992 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.73■□□□□ 0.43
ERCC1P07992 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
ERCC1P07992 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
ERCC1P07992 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC1P07992 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC1P07992 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC1P07992 AL512625.2-201ENST00000417533 625 ntBASIC17.73■□□□□ 0.43
ERCC1P07992 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC1P07992 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC1P07992 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC1P07992 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
ERCC1P07992 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC1P07992 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
ERCC1P07992 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.73■□□□□ 0.43
ERCC1P07992 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
ERCC1P07992 AC092720.2-201ENST00000602388 1665 ntBASIC17.73■□□□□ 0.43
ERCC1P07992 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ERCC1P07992 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC1P07992 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC1P07992 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC1P07992 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC1P07992 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
ERCC1P07992 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC1P07992 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC1P07992 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC1P07992 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC1P07992 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC1P07992 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
ERCC1P07992 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC1P07992 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.72■□□□□ 0.43
ERCC1P07992 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.72■□□□□ 0.43
ERCC1P07992 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC1P07992 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC1P07992 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC1P07992 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC1P07992 AL512408.1-201ENST00000569378 2000 ntBASIC17.72■□□□□ 0.43
ERCC1P07992 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC1P07992 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC1P07992 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ERCC1P07992 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC1P07992 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC1P07992 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC1P07992 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC1P07992 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC1P07992 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC1P07992 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC1P07992 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC1P07992 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC1P07992 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC1P07992 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC1P07992 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC1P07992 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC1P07992 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC1P07992 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ERCC1P07992 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC1P07992 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC1P07992 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ERCC1P07992 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC1P07992 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC1P07992 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC1P07992 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ERCC1P07992 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC1P07992 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC1P07992 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC1P07992 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC1P07992 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ERCC1P07992 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC1P07992 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ERCC1P07992 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ERCC1P07992 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.7■□□□□ 0.42
ERCC1P07992 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC1P07992 AC069152.1-201ENST00000438030 544 ntBASIC17.7■□□□□ 0.42
ERCC1P07992 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC1P07992 CD99P1-205ENST00000527459 561 ntBASIC17.7■□□□□ 0.42
ERCC1P07992 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.7■□□□□ 0.42
ERCC1P07992 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.7■□□□□ 0.42
ERCC1P07992 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms